RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SOAT1P35610 550 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 PRKAG1P54619 331 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 STX1BP61266 288 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 EFR3AQ14156 821 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 MLC1Q15049 377 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.27■□□□□ 0.51
VEGFB-201ENST00000309422 ANXA8L1Q5VT79 327 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 PRAMEF20Q5VT98 475 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 BNC2Q6ZN30 1099 aaPredicted RBP18.27■□□□□ 0.51
VEGFB-201ENST00000309422 PRR22Q8IZ63 422 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 OR2M7Q8NG81 312 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 OR7A2PQ8NGA2 310 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 PRR7Q8TB68 274 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 OR5P2Q8WZ92 322 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 MOAP1Q96BY2 351 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 ZNF597Q96LX8 424 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 MAGEB18Q96M61 343 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 JSRP1Q96MG2 331 aaPredicted RBP18.27■□□□□ 0.51
VEGFB-201ENST00000309422 EQTNQ9NQ60 294 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 KLRF1Q9NZS2 232 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 NPIPA1Q9UND3 350 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 EXO1Q9UQ84 846 aaKnown RBP18.27■□□□□ 0.51
VEGFB-201ENST00000309422 DTX4Q9Y2E6 619 aa18.27■□□□□ 0.51
VEGFB-201ENST00000309422 GOLGA8QA0A0J9YX86 632 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 GOLGA8OA6NCC3 632 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 GOLGA8NF8WBI6 632 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 G3V3Y1 287 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 SDHDO14521 159 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 REM1O75628 298 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 UNC5CO95185 931 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 KCNH1O95259 989 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 CCL3P10147 92 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 IDO1P14902 403 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 EPHA3P29320 983 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 KIR3DL1P43629 444 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 PRIM2P49643 509 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 FBXW4P57775 412 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 C21orf58P58505 322 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 MRPL49Q13405 166 aaKnown RBP18.26■□□□□ 0.51
VEGFB-201ENST00000309422 DECR1Q16698 335 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 ZNF385BQ569K4 471 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 PACS2Q86VP3 889 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 ZNF227Q86WZ6 799 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 SLC44A2Q8IWA5 706 aaPredicted RBP18.26■□□□□ 0.51
VEGFB-201ENST00000309422 GHDCQ8N2G8 530 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 KRTCAP2Q8N6L1 136 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 ZFP62Q8NB50 900 aaPredicted RBP18.26■□□□□ 0.51
VEGFB-201ENST00000309422 JADE3Q92613 823 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 VSTM2LQ96N03 204 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 GPR137Q96N19 417 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 ZCCHC3Q9NUD5 404 aaKnown RBP18.26■□□□□ 0.51
VEGFB-201ENST00000309422 GPR55Q9Y2T6 319 aaPredicted RBP18.26■□□□□ 0.51
VEGFB-201ENST00000309422 USH1CQ9Y6N9 552 aa18.26■□□□□ 0.51
VEGFB-201ENST00000309422 UPK1AO00322 258 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 TO15178 435 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 EMC8O43402 210 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 CDC40O60508 579 aaKnown RBP eCLIP18.25■□□□□ 0.51
VEGFB-201ENST00000309422 SNX4O95219 450 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 CBX6O95503 412 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 LAMP1P11279 417 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 UQCRFS1P47985 274 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 DIO3P55073 304 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 PPIAP62937 165 aaKnown RBP18.25■□□□□ 0.51
VEGFB-201ENST00000309422 TMEM198Q66K66 360 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 LARP4Q71RC2 724 aaKnown RBP eCLIP18.25■□□□□ 0.51
VEGFB-201ENST00000309422 NUP54Q7Z3B4 507 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 CDRT4Q8N9R6 151 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 NUP43Q8NFH3 380 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 OR56A1Q8NGH5 318 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 COL21A1Q96P44 957 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 TSPAN10Q9H1Z9 355 aaPredicted RBP18.25■□□□□ 0.51
VEGFB-201ENST00000309422 ANKRA2Q9H9E1 313 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 IL1RL2Q9HB29 575 aa18.25■□□□□ 0.51
VEGFB-201ENST00000309422 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.25■□□□□ 0.51
VEGFB-201ENST00000309422 E9PBE3 544 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 TGDSO95455 350 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 ABCB1P08183 1280 aaPredicted RBP18.24■□□□□ 0.51
VEGFB-201ENST00000309422 ABOP16442 354 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 RFC3P40938 356 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 FRKP42685 505 aaPredicted RBP18.24■□□□□ 0.51
VEGFB-201ENST00000309422 DNASE1L1P49184 302 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 CLK3P49761 638 aaKnown RBP18.24■□□□□ 0.51
VEGFB-201ENST00000309422 PER3P56645 1201 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 DUSP8Q13202 625 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 TP53BP2Q13625 1128 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 TMEM64Q6YI46 380 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 CAMKMTQ7Z624 323 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 EID3Q8N140 333 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 SPPL2AQ8TCT8 520 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 ACTRT2Q8TDY3 377 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 TMBIM1Q969X1 311 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 TTTY12Q9BZ98 90 aa18.24■□□□□ 0.51
VEGFB-201ENST00000309422 WDR55Q9H6Y2 383 aaPredicted RBP18.24■□□□□ 0.51
VEGFB-201ENST00000309422 FAF1Q9UNN5 650 aaPredicted RBP18.24■□□□□ 0.51
VEGFB-201ENST00000309422 OR6C70A6NIJ9 312 aa18.23■□□□□ 0.51
VEGFB-201ENST00000309422 ATP8B1O43520 1251 aa18.23■□□□□ 0.51
VEGFB-201ENST00000309422 ZNF354AO60765 605 aaPredicted RBP18.23■□□□□ 0.51
VEGFB-201ENST00000309422 AGFG2O95081 481 aa18.23■□□□□ 0.51
VEGFB-201ENST00000309422 S100A3P33764 101 aa18.23■□□□□ 0.51
VEGFB-201ENST00000309422 GCKP35557 465 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms