RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 NDUFB5O43674 189 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 PEX2P28328 305 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ARF3P61204 181 aaPredicted RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 ARF1P84077 181 aaKnown RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 PLGLB1Q02325 96 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 HYAL4Q2M3T9 481 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 P2RY13Q9BPV8 354 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 PADI3Q9ULW8 664 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 PLXNA3P51805 1871 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 KIAA0100Q14667 2235 aaKnown RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 ATP6V1G2-DDX39BF2Z307 99 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 AHSA1O95433 338 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ABHD16AO95870 558 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 GAAP10253 952 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 TUBG1P23258 451 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ARHGAP1Q07960 439 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 GRM7Q14831 915 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 NOXRED1Q6NXP6 359 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 TCTE3Q8IZS6 198 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.83□□□□□ -1.8
USH2A-201ENST00000307340 UXS1Q8NBZ7 420 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 FRS2Q8WU20 508 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 EDAQ92838 391 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ELP4Q96EB1 424 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 GAS2L1Q99501 681 aaPredicted RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 GPR21Q99679 349 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 COQ10BQ9H8M1 238 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 TUBG2Q9NRH3 451 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 SLC2A9Q9NRM0 540 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 MYOTQ9UBF9 498 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 CASTOR2A6NHX0 329 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 TARM1B6A8C7 271 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 NPIPA5E9PKD4 350 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 PRH1P02810 166 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ZNF43P17038 809 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 GPLD1P80108 840 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 SOWAHAQ2M3V2 549 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 BTBD16Q32M84 506 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 LMO3Q8TAP4 145 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 SYT17Q9BSW7 474 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 TMPRSS4Q9NRS4 437 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 RXFP3Q9NSD7 469 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ENPP5Q9UJA9 477 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 NPIPA1Q9UND3 350 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 POU2F2P09086 479 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 NADK2Q4G0N4 442 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 KDM8Q8N371 416 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 SPATA6LQ8N4H0 392 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 AQP11Q8NBQ7 271 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 OR52H1Q8NGJ2 320 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 UBTD2Q8WUN7 234 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 OR11A1Q9GZK7 315 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 J3QR89 54 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TRIM23P36406 574 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 MC1RQ01726 317 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 COX19Q49B96 90 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TMEM69Q5SWH9 247 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 NXNL2Q5VZ03 156 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ANKRD46Q86W74 232 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 OR51A2Q8NGJ7 313 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 SECISBP2Q96T21 854 aaKnown RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 SEMA4GQ9NTN9 838 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ZCCHC3Q9NUD5 404 aaKnown RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 UTS2RQ9UKP6 389 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 LRIT2A6NDA9 550 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TSPAN15O95858 294 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 RPL34P49207 117 aaKnown RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 CLCNKBP51801 687 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 MS4A13Q5J8X5 152 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 NDUFAF5Q5TEU4 345 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 GSG1LQ6UXU4 331 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 SGPP2Q8IWX5 399 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 VWA5B2Q8N398 1253 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ZNF614Q8N883 585 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 GPR148Q8TDV2 347 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 CLSTN3Q9BQT9 956 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ADAM19Q9H013 955 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 PCDHB10Q9UN67 800 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ANKRD61A6NGH8 418 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 A6NLC8 198 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 SNCGO76070 127 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 HTR3BO95264 441 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 CPA2P48052 419 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 RRADP55042 308 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TLDC1Q6P9B6 456 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 OR6V1Q8N148 313 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TCTEX1D2Q8WW35 142 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 LHX6Q9UPM6 363 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 GABARAPH6UMI1 98 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 GABARAPO95166 117 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 C6orf141Q5SZD1 244 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 MLIPQ5VWP3 458 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ZNF574Q6ZN55 896 aaPredicted RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 OR8H1Q8NGG4 311 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 MGLLQ99685 303 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 CMSS1Q9BQ75 279 aaKnown RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 TIMM29Q9BSF4 260 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 CKAP5Q14008 2032 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 SCAMP2O15127 329 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms