RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 PTGER1P34995 402 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 RPS6KA3P51812 740 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 PFN3P60673 137 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 MRPL49Q13405 166 aaKnown RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 SPATS1Q496A3 300 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 LNX2Q8N448 690 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 ZNF317Q96PQ6 595 aaPredicted RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 DPH2Q9BQC3 489 aaPredicted RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 SMURF2Q9HAU4 748 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 PAPOLBQ9NRJ5 636 aaKnown RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 LRCH1Q9Y2L9 728 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 BRWD1Q9NSI6 2320 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 LOC100506127A0A0U1RQW1 187 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 A0A1B0GTQ1 180 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 IDSB3KWA1 339 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 GFYI3L273 518 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 SERPINA3P01011 423 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 POU3F2P20265 443 aaPredicted RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 MYL9P24844 172 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 SLC6A8P48029 635 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 BNIPLQ7Z465 357 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 L3MBTL4Q8NA19 623 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 PROKR1Q8TCW9 393 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 FKBP10Q96AY3 582 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 ANKRD27Q96NW4 1050 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 NUDT22Q9BRQ3 303 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 NPLQ9BXD5 320 aaPredicted RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 TMEM185BQ9H7F4 350 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 RHCGQ9UBD6 479 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 ZNF236Q9UL36 1845 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 BRCA1P38398 1863 aaKnown RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 KLRC4-KLRK1H3BQV0 150 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 DIRAS1O95057 198 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 F10P00742 488 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 TRIM23P36406 574 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 TSFMP43897 325 aaKnown RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 DNASE1L1P49184 302 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 ABHD17CQ6PCB6 329 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 TMPPEQ6ZT21 453 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 CXXC5Q7LFL8 322 aaKnown RBP8.72□□□□□ -1.01
PTPRE-202ENST00000306042 ABI3BPQ7Z7G0 1075 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 HS6ST2Q96MM7 605 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 ZNF559Q9BR84 538 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 CD248Q9HCU0 757 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 BTNL2Q9UIR0 455 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 POMT2Q9UKY4 750 aa8.72□□□□□ -1.01
PTPRE-202ENST00000306042 LRP3O75074 770 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 SNNO75324 88 aaPredicted RBP8.71□□□□□ -1.01
PTPRE-202ENST00000306042 BCL10O95999 233 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 CYB561P49447 251 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 HSD17B7P56937 341 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 ZZZ3Q8IYH5 903 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 GPR137CQ8N3F9 429 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 STT3BQ8TCJ2 826 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 CANT1Q8WVQ1 401 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 CLK4Q9HAZ1 481 aaKnown RBP8.71□□□□□ -1.01
PTPRE-202ENST00000306042 POFUT2Q9Y2G5 429 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 GABRR3A8MPY1 467 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 SLITRK5O94991 958 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 KDELR2P33947 212 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 GDI2P50395 445 aaKnown RBP8.71□□□□□ -1.01
PTPRE-202ENST00000306042 SMSP52788 366 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 ALG10BQ5I7T1 473 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.71□□□□□ -1.01
PTPRE-202ENST00000306042 STPG1Q5TH74 334 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 ISLR2Q6UXK2 745 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 RPS19BP1Q86WX3 136 aaKnown RBP8.71□□□□□ -1.01
PTPRE-202ENST00000306042 GPBAR1Q8TDU6 330 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 TP53INP1Q96A56 240 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 MVB12AQ96EY5 273 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 NANSQ9NR45 359 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 UCKL1Q9NWZ5 548 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 PCDHA9Q9Y5H5 950 aa8.71□□□□□ -1.01
PTPRE-202ENST00000306042 SPAARA0A1B0GVQ0 90 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 RAD1O60671 282 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 UBL4AP11441 157 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 MAOAP21397 527 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 PTDSS1P48651 473 aaKnown RBP8.71□□□□□ -1.02
PTPRE-202ENST00000306042 PON3Q15166 354 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 CHERPQ8IWX8 916 aaKnown RBP8.71□□□□□ -1.02
PTPRE-202ENST00000306042 ZNF419Q96HQ0 510 aaPredicted RBP8.71□□□□□ -1.02
PTPRE-202ENST00000306042 WDR77Q9BQA1 342 aaPredicted RBP8.71□□□□□ -1.02
PTPRE-202ENST00000306042 UCK2Q9BZX2 261 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 COMMD4Q9H0A8 199 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 BRD7Q9NPI1 651 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 NKIRAS2Q9NYR9 191 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 MEN1O00255 615 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 DSCR3O14972 297 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 STK17BO94768 372 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 EIF1AXP47813 144 aaKnown RBP8.71□□□□□ -1.02
PTPRE-202ENST00000306042 MCCD1P59942 119 aaPredicted RBP8.71□□□□□ -1.02
PTPRE-202ENST00000306042 UBE2NP61088 152 aaKnown RBP8.71□□□□□ -1.02
PTPRE-202ENST00000306042 CBFBQ13951 182 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 MFSD13AQ14CX5 517 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 CLPPQ16740 277 aaPredicted RBP8.71□□□□□ -1.02
PTPRE-202ENST00000306042 DCST2Q5T1A1 773 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 CES4AQ5XG92 561 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 CARD17Q5XLA6 110 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 FAM180AQ6UWF9 173 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 ALDH16A1Q8IZ83 802 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms