RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 LAIR2Q6ISS4 152 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 VRK2Q86Y07 508 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 DHRS1Q96LJ7 313 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 CXorf21Q9HAI6 301 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 ADAP2Q9NPF8 381 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 IRAK4Q9NWZ3 460 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 ACAD8Q9UKU7 415 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 GPR55Q9Y2T6 319 aaPredicted RBP11.31□□□□□ -0.6
SDE2-201ENST00000272091 UNC13CQ8NB66 2214 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 ADAMDEC1O15204 470 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 MSL3P1P0C860 447 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 PABPC4LP0CB38 370 aaKnown RBP11.31□□□□□ -0.6
SDE2-201ENST00000272091 ANXA11P50995 505 aaKnown RBP11.31□□□□□ -0.6
SDE2-201ENST00000272091 ARHGAP11BQ3KRB8 267 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 TYW3Q6IPR3 259 aaKnown RBP11.31□□□□□ -0.6
SDE2-201ENST00000272091 ZNF595Q8IYB9 648 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 EID2Q8N6I1 236 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 VANGL1Q8TAA9 524 aaPredicted RBP11.31□□□□□ -0.6
SDE2-201ENST00000272091 SLC9A6Q92581 669 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 FUZQ9BT04 418 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 SMOC1Q9H4F8 434 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 NECTIN3Q9NQS3 549 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 FBXO34Q9NWN3 711 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 DHCR7Q9UBM7 475 aaKnown RBP11.31□□□□□ -0.6
SDE2-201ENST00000272091 COL5A1P20908 1838 aaPredicted RBP11.31□□□□□ -0.6
SDE2-201ENST00000272091 CPED1A4D0V7 1026 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 CLPSP04118 112 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 ITGAMP11215 1152 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 RHCEP18577 417 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 CLK3P49761 638 aaKnown RBP11.3□□□□□ -0.6
SDE2-201ENST00000272091 MAP4K2Q12851 820 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 TTLL10Q6ZVT0 673 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 ZBTB44Q8NCP5 570 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 ADAMTS15Q8TE58 950 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 PRTFDC1Q9NRG1 225 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 NINQ8N4C6 2090 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 BDP1A6H8Y1 2624 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 TMEM247A6NEH6 219 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 LGI1O95970 557 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 SP9P0CG40 484 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 OR1D4P47884 311 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 AVPR1BP47901 424 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 SLC13A2Q13183 592 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 CCNJQ5T5M9 372 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 MLIPQ5VWP3 458 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 TMEM71Q6P5X7 295 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 SLC5A8Q8N695 610 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 PIK3R3Q92569 461 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 RNF31Q96EP0 1072 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 PIGUQ9H490 435 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 A4GNTQ9UNA3 340 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 DTX4Q9Y2E6 619 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 SLC16A6O15403 523 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 SERPINB7O75635 380 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 SEC24DO94855 1032 aaPredicted RBP11.3□□□□□ -0.6
SDE2-201ENST00000272091 SLITRK5O94991 958 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 ITGA2P17301 1181 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 LPAL2Q16609 132 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 CTU2Q2VPK5 515 aaKnown RBP11.3□□□□□ -0.6
SDE2-201ENST00000272091 ZNF770Q6IQ21 691 aaPredicted RBP11.3□□□□□ -0.6
SDE2-201ENST00000272091 KRT80Q6KB66 452 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 NIPAL1Q6NVV3 410 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 SLC23A3Q6PIS1 610 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 KMT5CQ86Y97 462 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 CHDHQ8NE62 594 aaPredicted RBP11.3□□□□□ -0.6
SDE2-201ENST00000272091 PIK3C3Q8NEB9 887 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 OR9Q2Q8NGE9 314 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 OR52R1Q8NGF1 315 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 PROX1Q92786 737 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 SDF2Q99470 211 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 PSD2Q9BQI7 771 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 ALOXE3Q9BYJ1 711 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 GRIP2Q9C0E4 1043 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 PDP2Q9P2J9 529 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 KCNE5Q9UJ90 142 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 LIPT1Q9Y234 373 aa11.3□□□□□ -0.6
SDE2-201ENST00000272091 TPST2O60704 377 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 SEC23BQ15437 767 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 MICAQ29983 383 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 LSRQ86X29 649 aaPredicted RBP11.29□□□□□ -0.6
SDE2-201ENST00000272091 ST13P4Q8IZP2 240 aaPredicted RBP11.29□□□□□ -0.6
SDE2-201ENST00000272091 VWA5B2Q8N398 1253 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 NIPSNAP1Q9BPW8 284 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 MKLN1Q9UL63 735 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 PCDHGA8Q9Y5G5 932 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 TRBV4-1A0A0J9YWV2 114 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 LOC100130705A0A1B0GUX0 176 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 GXYLT2A0PJZ3 443 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 TFAP2AP05549 437 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 ELK4P28324 431 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 HOXD12P35452 270 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 EMDP50402 254 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 TRIM61Q5EBN2 209 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 ZNF691Q5VV52 312 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 C16orf62Q7Z3J2 963 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 ARHGAP22Q7Z5H3 698 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 KRT73Q86Y46 540 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 OR6T1Q8NGN1 323 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 ADAMTS18Q8TE60 1221 aa11.29□□□□□ -0.6
SDE2-201ENST00000272091 GIPC3Q8TF64 312 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms