RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 SHFQ7M4L6 423 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 KLBQ86Z14 1044 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 FTMTQ8N4E7 242 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 PROKR2Q8NFJ6 384 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 TOR1AIP2Q8NFQ8 470 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 OR4K5Q8NGD3 323 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 HUS1BQ8NHY5 278 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 HMGB4Q8WW32 186 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 OSTF1Q92882 214 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF707Q96C28 371 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 PCBD2Q9H0N5 130 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 NCDNQ9UBB6 729 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 OSGIN1Q9UJX0 560 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 PCDHGB1Q9Y5G3 927 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 MAU2Q9Y6X3 613 aa10.93□□□□□ -0.66
CLSTN3-201ENST00000266546 SLC31A1O15431 190 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 HK1P19367 917 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 TNFRSF4P43489 277 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 GBX2P52951 348 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 RAB8AP61006 207 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 CCDC58Q4VC31 144 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 OLFML2AQ68BL7 652 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 TANGO2Q6ICL3 276 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 RTL4Q6ZR62 310 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 TMEM179BQ7Z7N9 219 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 LRRTM4Q86VH4 590 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 GPR26Q8NDV2 337 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 ZSWIM3Q96MP5 696 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 MCCC1Q96RQ3 725 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 RHNO1Q9BSD3 238 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 SLIRPQ9GZT3 109 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 C11orf54Q9H0W9 315 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 MTG2Q9H4K7 406 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 WDR26Q9H7D7 661 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 SOHLH2Q9NX45 425 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 A0A1B0GTL3 188 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 IL3P08700 152 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 DRD1P21728 446 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 CFL1P23528 166 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 VASPP50552 380 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 BIKQ13323 160 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 TRAM2Q15035 370 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 SF1Q15637 639 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 SLC16A12Q6ZSM3 486 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 SYNPOQ8N3V7 929 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 TSTD1Q8NFU3 115 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 SLC12A9Q9BXP2 914 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 TCF7L1Q9HCS4 588 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 FBXL12Q9NXK8 326 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 BTNL2Q9UIR0 455 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 LOC105369274A0A096LPK9 316 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 H7C2Y5 167 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 PDCD5O14737 125 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 KCNK5O95279 499 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 MT-ND5P03915 603 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 ALAS2P22557 587 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 MAT2AP31153 395 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 MASP1P48740 699 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 HK3P52790 923 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 RIPPLY1Q0D2K3 151 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 LASP1Q14847 261 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 POU4F3Q15319 338 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 PYCR3Q53H96 274 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 ADIPOR2Q86V24 386 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 OR4N4Q8N0Y3 316 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 MFSD4AQ8N468 514 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 GALNT11Q8NCW6 608 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 ACTR6Q9GZN1 396 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 IKZF5Q9H5V7 419 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 TAS2R10Q9NYW0 307 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 GPR52Q9Y2T5 361 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 PCDHGA6Q9Y5G7 932 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 ALG5Q9Y673 324 aa10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 NUP214P35658 2090 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-201ENST00000266546 B8ZZF3 427 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 APOC3P02656 99 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 TRAPPC2P0DI81 140 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 TRAPPC2BP0DI82 140 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 RPS21P63220 83 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF91Q05481 1191 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 MLLT11Q13015 90 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNHIT3Q15649 155 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 CST6Q15828 149 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 C4orf46Q504U0 113 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 SLC35F1Q5T1Q4 408 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 LIPIQ6XZB0 460 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 SPAG16Q8N0X2 631 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 OR8K5Q8NH50 307 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 SLC5A11Q8WWX8 675 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 RAB11FIP5Q9BXF6 653 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF576Q9H609 170 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 RDH14Q9HBH5 336 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 RBFOX1Q9NWB1 397 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 CLEC4EQ9ULY5 219 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 CDH10Q9Y6N8 788 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 AP1M2Q9Y6Q5 423 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 TRBV23OR9-2A0A075B6M9 112 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 MAN2B1O00754 1011 aa10.91□□□□□ -0.66
CLSTN3-201ENST00000266546 FLRT2O43155 660 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms