RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 JUPP14923 745 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 BPIP17213 487 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 CCR7P32248 378 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 HNF1BP35680 557 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 LSM11P83369 360 aaKnown RBP eCLIP15.4■□□□□ 0.06
GPC1-201ENST00000264039 SYT14P1Q58G82 188 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 FAM74A1Q5RGS3 127 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 MANEALQ5VSG8 457 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 MMP21Q8N119 569 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 OR52N2Q8NGI0 321 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 SLC7A13Q8TCU3 470 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 TTC9Q92623 222 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 QRSL1Q9H0R6 528 aaKnown RBP15.4■□□□□ 0.06
GPC1-201ENST00000264039 ZMAT5Q9UDW3 170 aaKnown RBP15.4■□□□□ 0.06
GPC1-201ENST00000264039 SCP2D1Q9UJQ7 156 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 MRTO4Q9UKD2 239 aaKnown RBP15.4■□□□□ 0.06
GPC1-201ENST00000264039 CDH10Q9Y6N8 788 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 SDK1Q7Z5N4 2213 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 CDH4P55283 916 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 RGS8P57771 180 aaPredicted RBP15.4■□□□□ 0.06
GPC1-201ENST00000264039 ZNF763Q0D2J5 394 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 SEC23BQ15437 767 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 RAB12Q6IQ22 244 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 BHLHA9Q7RTU4 235 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 CACUL1Q86Y37 369 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 VRK3Q8IV63 474 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 OSGEPL1Q9H4B0 414 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 MARK1Q9P0L2 795 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 GMEB2Q9UKD1 530 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 ASF1AQ9Y294 204 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 ZNF638Q14966 1978 aaKnown RBP15.4■□□□□ 0.06
GPC1-201ENST00000264039 WISP3O95389 354 aaPredicted RBP15.4■□□□□ 0.06
GPC1-201ENST00000264039 ACADLP28330 430 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 MRPS6P82932 125 aaKnown RBP15.4■□□□□ 0.06
GPC1-201ENST00000264039 KRT33BQ14525 404 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 LRRC46Q96FV0 321 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 ZNF582Q96NG8 517 aaPredicted RBP15.4■□□□□ 0.06
GPC1-201ENST00000264039 MGME1Q9BQP7 344 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 MED20Q9H944 212 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 TAS2R10Q9NYW0 307 aa15.4■□□□□ 0.06
GPC1-201ENST00000264039 GPR171O14626 319 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 PPM1BO75688 479 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 DDNO94850 711 aaPredicted RBP15.39■□□□□ 0.05
GPC1-201ENST00000264039 POU3F2P20265 443 aaPredicted RBP15.39■□□□□ 0.05
GPC1-201ENST00000264039 TIA1P31483 386 aaKnown RBP eCLIP15.39■□□□□ 0.05
GPC1-201ENST00000264039 CLDN12P56749 244 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 ACVR1Q04771 509 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 LASP1Q14847 261 aaKnown RBP15.39■□□□□ 0.05
GPC1-201ENST00000264039 CPOQ8IVL8 374 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 TMEM185AQ8NFB2 350 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 OR7G3Q8NG95 312 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 DOK4Q8TEW6 326 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 OR2M2Q96R28 347 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 MBD2Q9UBB5 411 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 PCDHGA9Q9Y5G4 932 aaKnown RBP15.39■□□□□ 0.05
GPC1-201ENST00000264039 NUBP2Q9Y5Y2 271 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 TRBV5-3A0A0A0MS03 114 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 A0A1B0GVI7 797 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 RAB19A4D1S5 217 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 ZNF705EA8MWA4 302 aaPredicted RBP15.39■□□□□ 0.05
GPC1-201ENST00000264039 GNB5O14775 395 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 PRICKLE3O43900 615 aaPredicted RBP15.39■□□□□ 0.05
GPC1-201ENST00000264039 FZD7O75084 574 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 C8orf89P0DMQ9 161 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 GNSP15586 552 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 HK1P19367 917 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 HOXD9P28356 352 aaPredicted RBP15.39■□□□□ 0.05
GPC1-201ENST00000264039 HTR4Q13639 388 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 SLC9A5Q14940 896 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 COMMD6Q7Z4G1 85 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 WDR53Q7Z5U6 358 aaPredicted RBP15.39■□□□□ 0.05
GPC1-201ENST00000264039 KIAA0907Q7Z7F0 614 aaPredicted RBP15.39■□□□□ 0.05
GPC1-201ENST00000264039 OR52E4Q8NGH9 312 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 COMMD9Q9P000 198 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 LRFN2Q9ULH4 789 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 ABCA3Q99758 1704 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 CCL15-CCL14A0A0B4J2E2 113 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 A0A1B0GVM2 712 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 MEIS3P1A6NDR6 274 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 SLC16A8O95907 504 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 EIF4EP06730 217 aaKnown RBP15.39■□□□□ 0.05
GPC1-201ENST00000264039 ZNF865P0CJ78 1059 aaPredicted RBP15.39■□□□□ 0.05
GPC1-201ENST00000264039 RRASP10301 218 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 ZNF30P17039 623 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 IL1RNP18510 177 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 AOAHP28039 575 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 CCL15Q16663 113 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 ARHGAP15Q53QZ3 475 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 CLLU1Q5K131 121 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 HECTD3Q5T447 861 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 HDDC3Q8N4P3 179 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 CYB561A3Q8NBI2 242 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 OR52L1Q8NGH7 329 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 RTP3Q9BQQ7 232 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 BTBD1Q9H0C5 482 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 MVB12BQ9H7P6 319 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 EXOSC1Q9Y3B2 195 aaKnown RBP15.39■□□□□ 0.05
GPC1-201ENST00000264039 CCL27Q9Y4X3 112 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 FKBP7Q9Y680 259 aa15.39■□□□□ 0.05
GPC1-201ENST00000264039 ZC3H12DA2A288 527 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms