RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 RPS17P08708 135 aaKnown RBP11.17□□□□□ -0.62
TRAF4-202ENST00000262396 RHOXF2BP0C7M4 288 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 CTAGE8P0CG41 777 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 PCSK2P16519 638 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 PTPN6P29350 595 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 PPICP45877 212 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 ZNF136P52737 540 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 MRPS35P82673 323 aaKnown RBP11.17□□□□□ -0.62
TRAF4-202ENST00000262396 LTB4RQ15722 352 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 TRMT12Q53H54 448 aaKnown RBP11.17□□□□□ -0.62
TRAF4-202ENST00000262396 SH2D4BQ5SQS7 431 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 FAM180BQ6P0A1 224 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 LETMD1Q6P1Q0 360 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 GPRIN3Q6ZVF9 776 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 SEM1Q6ZVN7 128 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 GRAMD2AQ8IUY3 354 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 TRIM42Q8IWZ5 723 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 CTAGE4Q8IX94 777 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 MMP21Q8N119 569 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 NAXEQ8NCW5 288 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 LINC01560Q8TB33 94 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 ZNF483Q8TF39 744 aaPredicted RBP11.17□□□□□ -0.62
TRAF4-202ENST00000262396 TMBIM1Q969X1 311 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 WDYHV1Q96HA8 205 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 NODALQ96S42 347 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 ADOQ96SZ5 270 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 NDRG3Q9UGV2 375 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 ZNF180Q9UJW8 692 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 EIF3LQ9Y262 564 aaKnown RBP11.17□□□□□ -0.62
TRAF4-202ENST00000262396 DTX4Q9Y2E6 619 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 DLGAP4Q9Y2H0 992 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 C2CD3Q4AC94 2353 aa11.17□□□□□ -0.62
TRAF4-202ENST00000262396 HCFC1P51610 2035 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 FRG2CA6NGY1 282 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 MANBAO00462 879 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 UGT2B11O75310 529 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 IL3P08700 152 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 EPXP11678 715 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 HSD3B1P14060 373 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 DRD2P14416 443 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 DRD5P21918 477 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 HSD3B2P26439 372 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 MPIP34949 423 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 CPOXP36551 454 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 HSD17B3P37058 310 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 CLK3P49761 638 aaKnown RBP11.16□□□□□ -0.62
TRAF4-202ENST00000262396 NAGLUP54802 743 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 EEF1A1P68104 462 aaKnown RBP11.16□□□□□ -0.62
TRAF4-202ENST00000262396 ZNF155Q12901 538 aaPredicted RBP11.16□□□□□ -0.62
TRAF4-202ENST00000262396 CSTF3Q12996 717 aaKnown RBP11.16□□□□□ -0.62
TRAF4-202ENST00000262396 SPIN4Q56A73 249 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 NHSL2Q5HYW2 709 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 EEF1A1P5Q5VTE0 462 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 LARP4Q71RC2 724 aaKnown RBP eCLIP11.16□□□□□ -0.623e-6■■□□□ 13
TRAF4-202ENST00000262396 CAMKMTQ7Z624 323 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 PLCZ1Q86YW0 608 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 TGIF2LYQ8IUE0 185 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 SLC22A9Q8IVM8 553 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 FAM9CQ8IZT9 166 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 GBP7Q8N8V2 638 aaPredicted RBP11.16□□□□□ -0.62
TRAF4-202ENST00000262396 ZPLD1Q8TCW7 415 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 KAT2AQ92830 837 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 INTS12Q96CB8 462 aaKnown RBP11.16□□□□□ -0.62
TRAF4-202ENST00000262396 MTBPQ96DY7 904 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 ZFP3Q96NJ6 502 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 SH3GL2Q99962 352 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 SFXN3Q9BWM7 321 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 UBQLN3Q9H347 655 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 MIEF1Q9NQG6 463 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 TAS2R9Q9NYW1 312 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 MCM8Q9UJA3 840 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 CBLCQ9ULV8 474 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 EXO1Q9UQ84 846 aaKnown RBP11.16□□□□□ -0.62
TRAF4-202ENST00000262396 RPH3AQ9Y2J0 694 aaPredicted RBP11.16□□□□□ -0.62
TRAF4-202ENST00000262396 EML6Q6ZMW3 1958 aa11.16□□□□□ -0.62
TRAF4-202ENST00000262396 MBD3L4A6NDZ8 208 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-202ENST00000262396 MBD3L3A6NE82 208 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-202ENST00000262396 MBD3L5A6NJ08 208 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-202ENST00000262396 KDM4EB2RXH2 506 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-202ENST00000262396 PPP6CO00743 305 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 COQ9O75208 318 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 SMNDC1O75940 238 aaKnown RBP eCLIP11.15□□□□□ -0.623e-7■■■■□ 21.5
TRAF4-202ENST00000262396 CBX7O95931 251 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 IL18BPO95998 194 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 RAF1P04049 648 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 GSTA1P08263 222 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 KLK2P20151 261 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 ATP5F1P24539 256 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-202ENST00000262396 RFX3P48380 749 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 PSPHP78330 225 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 SORDQ00796 357 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 GALNT1Q10472 559 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-202ENST00000262396 GAB1Q13480 694 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 POU4F3Q15319 338 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 ZNHIT3Q15649 155 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-202ENST00000262396 FBXL19-AS1Q494R0 122 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 GLE1Q53GS7 698 aaKnown RBP11.15□□□□□ -0.62
TRAF4-202ENST00000262396 DCST1Q5T197 706 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 DESI1Q6ICB0 168 aa11.15□□□□□ -0.62
TRAF4-202ENST00000262396 OR5M10Q6IEU7 315 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms