RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 AKAP14Q86UN6 197 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 ZNF687Q8N1G0 1237 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 OR7G1Q8NGA0 311 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 PSMA8Q8TAA3 256 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 SLC9A6Q92581 669 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 TM4SF19Q96DZ7 209 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 NRBF2Q96F24 287 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 C10orf90Q96M02 699 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 OR7D2Q96RA2 312 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 HOXD1Q9GZZ0 328 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 NMNAT1Q9HAN9 279 aaPredicted RBP12.75□□□□□ -0.37
VMP1-201ENST00000262291 HMG20AQ9NP66 347 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 THSD1Q9NS62 852 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 SEMA3GQ9NS98 782 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 GIMAP4Q9NUV9 329 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 NDRG4Q9ULP0 352 aaKnown RBP12.75□□□□□ -0.37
VMP1-201ENST00000262291 NAALAD2Q9Y3Q0 740 aa12.75□□□□□ -0.37
VMP1-201ENST00000262291 AGRPO00253 132 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 CASC3O15234 703 aaKnown RBP12.74□□□□□ -0.37
VMP1-201ENST00000262291 ABCB7O75027 752 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 BCAS1O75363 584 aaPredicted RBP12.74□□□□□ -0.37
VMP1-201ENST00000262291 HOXB6P17509 224 aaKnown RBP12.74□□□□□ -0.37
VMP1-201ENST00000262291 KRT20P35900 424 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 KHKP50053 298 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 SMAD2Q15796 467 aaKnown RBP12.74□□□□□ -0.37
VMP1-201ENST00000262291 ZC3H12BQ5HYM0 836 aaKnown RBP12.74□□□□□ -0.37
VMP1-201ENST00000262291 TCTN3Q6NUS6 607 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 PLEKHG7Q6ZR37 379 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 SLCO6A1Q86UG4 719 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 C11orf74Q86VG3 221 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 PARGQ86W56 976 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 BAHD1Q8TBE0 780 aaPredicted RBP12.74□□□□□ -0.37
VMP1-201ENST00000262291 APOBEC4Q8WW27 367 aaKnown RBP12.74□□□□□ -0.37
VMP1-201ENST00000262291 CCDC3Q9BQI4 270 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 PRDM6Q9NQX0 595 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 POT1Q9NUX5 634 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 TMEM9Q9P0T7 183 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 PCDHGA6Q9Y5G7 932 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 WDR87Q6ZQQ6 2873 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 TNFSF14O43557 240 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 B3GALT2O43825 422 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 FAM20BO75063 409 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 DNAJB5O75953 348 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 CCNB2O95067 398 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 EPPINO95925 133 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 IGLV3-19P01714 112 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 ITGA2P17301 1181 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 DDX5P17844 614 aaKnown RBP12.74□□□□□ -0.37
VMP1-201ENST00000262291 POU3F3P20264 500 aaPredicted RBP12.74□□□□□ -0.37
VMP1-201ENST00000262291 TNFRSF17Q02223 184 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 CHRNEQ04844 493 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 MAD2L1BPQ15013 274 aaPredicted RBP12.74□□□□□ -0.37
VMP1-201ENST00000262291 SUZ12Q15022 739 aaKnown RBP12.74□□□□□ -0.37
VMP1-201ENST00000262291 DEFB133Q30KQ1 61 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 TRMT12Q53H54 448 aaKnown RBP12.74□□□□□ -0.37
VMP1-201ENST00000262291 CCNJQ5T5M9 372 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 KLHL17Q6TDP4 642 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 VRK2Q86Y07 508 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 ENTHD1Q8IYW4 607 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 METTL27Q8N6F8 245 aaPredicted RBP12.74□□□□□ -0.37
VMP1-201ENST00000262291 NATD1Q8N6N6 113 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 CSNK1A1LQ8N752 337 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 SLC16A11Q8NCK7 471 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 NT5CQ8TCD5 201 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 ZNF607Q96SK3 696 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 YTHDF1Q9BYJ9 559 aaKnown RBP12.74□□□□□ -0.37
VMP1-201ENST00000262291 CLCA2Q9UQC9 943 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 RNF6Q9Y252 685 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 NTNG1Q9Y2I2 539 aa12.74□□□□□ -0.37
VMP1-201ENST00000262291 SLC9B1P1A6NJY1 282 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 CLDN24A6NM45 220 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 FCMRO60667 390 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 CDC123O75794 336 aaPredicted RBP12.73□□□□□ -0.37
VMP1-201ENST00000262291 FHP07954 510 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 MYF5P13349 255 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 ALOX12P18054 663 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 RYKP34925 604 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 KCNJ5P48544 419 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 RPL6Q02878 288 aaKnown RBP12.73□□□□□ -0.37
VMP1-201ENST00000262291 MLC1Q15049 377 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 LRIT3Q3SXY7 679 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 ARMC6Q6NXE6 501 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 DEPDC4Q8N2C3 294 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 PSD4Q8NDX1 1056 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 RAB2BQ8WUD1 216 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 APH1BQ8WW43 257 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 NODALQ96S42 347 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 PHOX2BQ99453 314 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 APOL4Q9BPW4 351 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 FUNDC2Q9BWH2 189 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 MKLN1Q9UL63 735 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 DAPP1Q9UN19 280 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 GPR55Q9Y2T6 319 aaPredicted RBP12.73□□□□□ -0.37
VMP1-201ENST00000262291 ASXL3Q9C0F0 2248 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 CABIN1Q9Y6J0 2220 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 A0A0J9YY10 115 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 C10orf142B7Z368 130 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 TAF4O00268 1085 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 EMC8O43402 210 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms