RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ZNF768Q9H5H4 540 aaKnown RBP20.88■□□□□ 0.93
SIX3-201ENST00000260653 FAM118AQ9NWS6 357 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 RHCGQ9UBD6 479 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 FCMRO60667 390 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 SEMA7AO75326 666 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 SEC24DO94855 1032 aaPredicted RBP20.88■□□□□ 0.93
SIX3-201ENST00000260653 SLITRK5O94991 958 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 CNR2P34972 360 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 PRAMEF8Q5VWM4 474 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 PRAMEF7Q5VXH5 474 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 KDM4DQ6B0I6 523 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 TMEM71Q6P5X7 295 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 ZNF605Q86T29 641 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 KMT5CQ86Y97 462 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 LACC1Q8IV20 430 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 VWA5B2Q8N398 1253 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 FAM181AQ8N9Y4 354 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 CEP76Q8TAP6 659 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.88■□□□□ 0.93
SIX3-201ENST00000260653 ZG16BQ96DA0 208 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 ALOXE3Q9BYJ1 711 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 ZNF696Q9H7X3 374 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 GMEB2Q9UKD1 530 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 FAM32AQ9Y421 112 aaKnown RBP20.88■□□□□ 0.93
SIX3-201ENST00000260653 EME2A4GXA9 379 aaPredicted RBP20.87■□□□□ 0.93
SIX3-201ENST00000260653 A8MVJ9 347 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 ZNF749O43361 778 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 POLR2IP36954 125 aaKnown RBP20.87■□□□□ 0.93
SIX3-201ENST00000260653 OR1D4P47884 311 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 CCL7P80098 99 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 GPR135Q8IZ08 494 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 OR4C15Q8NGM1 316 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 MUS81Q96NY9 551 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 SMOC1Q9H4F8 434 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 CXorf21Q9HAI6 301 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 ENAMQ9NRM1 1142 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 KIF17Q9P2E2 1029 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 DSPPQ9NZW4 1301 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 DPPA5A6NC42 116 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 CLDN4O14493 209 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 FFAR1O14842 300 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 HYAL3O43820 417 aaPredicted RBP20.87■□□□□ 0.93
SIX3-201ENST00000260653 BMP10O95393 424 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 EPPINO95925 133 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 SMIM18P0DKX4 95 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 RHCEP18577 417 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 IL1RL1Q01638 556 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 FOXD4Q12950 439 aaPredicted RBP20.87■□□□□ 0.93
SIX3-201ENST00000260653 EXOC3L2Q2M3D2 409 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 ST13P4Q8IZP2 240 aaPredicted RBP20.87■□□□□ 0.93
SIX3-201ENST00000260653 ATG16L2Q8NAA4 619 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 SPATA5L1Q9BVQ7 753 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 CLK4Q9HAZ1 481 aaKnown RBP20.87■□□□□ 0.93
SIX3-201ENST00000260653 FGF21Q9NSA1 209 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 SLC6A14Q9UN76 642 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 ORC6Q9Y5N6 252 aa20.87■□□□□ 0.93
SIX3-201ENST00000260653 AGRPO00253 132 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 ARHGAP33O14559 1287 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 SMNDC1O75940 238 aaKnown RBP eCLIP20.86■□□□□ 0.93
SIX3-201ENST00000260653 CBX7O95931 251 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 RPLP0P05388 317 aaKnown RBP20.86■□□□□ 0.93
SIX3-201ENST00000260653 GCGRP47871 477 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 RAD23AP54725 363 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 IGLV3-21P80748 117 aaPredicted RBP20.86■□□□□ 0.93
SIX3-201ENST00000260653 EPS8Q12929 822 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 DEF8Q6ZN54 512 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 GALNT12Q8IXK2 581 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 SYNDIG1Q9H7V2 258 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 ACER3Q9NUN7 267 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 CALML5Q9NZT1 146 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 FER1L5A0AVI2 2057 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 BLACEA4D250 179 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 M0R3H8 397 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 CER1O95813 267 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 SP9P0CG40 484 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 NAT1P18440 290 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 HPCAP84074 193 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 DUSP8Q13202 625 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 EXOSC6Q5RKV6 272 aaKnown RBP20.86■□□□□ 0.93
SIX3-201ENST00000260653 TCTN3Q6NUS6 607 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 FAHD1Q6P587 224 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 GPR179Q6PRD1 2367 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 RABEPKQ7Z6M1 372 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 ZBTB44Q8NCP5 570 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 ZNF501Q96CX3 271 aaPredicted RBP20.86■□□□□ 0.93
SIX3-201ENST00000260653 RNF31Q96EP0 1072 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 RBM18Q96H35 190 aaKnown RBP20.86■□□□□ 0.93
SIX3-201ENST00000260653 SH3GL3Q99963 347 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 GTPBP2Q9BX10 602 aaKnown RBP20.86■□□□□ 0.93
SIX3-201ENST00000260653 MKLN1Q9UL63 735 aa20.86■□□□□ 0.93
SIX3-201ENST00000260653 HRKO00198 91 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 CPNE6O95741 557 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 AGR2O95994 175 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 RFX4Q33E94 735 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 TBC1D25Q3MII6 688 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 CCNJQ5T5M9 372 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 SLC23A3Q6PIS1 610 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 FRRS1Q6ZNA5 592 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 RCBTB1Q8NDN9 531 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 OR52R1Q8NGF1 315 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms