RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 DOHHQ9BU89 302 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 FOLH1BQ9HBA9 442 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 ACSS1Q9NUB1 689 aaPredicted RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 DDX18Q9NVP1 670 aaKnown RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 ARGLU1Q9NWB6 273 aaPredicted RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 QPCTLQ9NXS2 382 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 TUBA8Q9NY65 449 aaPredicted RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 SUCOQ9UBS9 1254 aaKnown RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 C19orf53Q9UNZ5 99 aaPredicted RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 GPR55Q9Y2T6 319 aaPredicted RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 ATP6AP2A0A1C7CYW4 349 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 OR6C70A6NIJ9 312 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 LRRC3CA6NJW4 275 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 FAM166BA8MTA8 275 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 G3V3Y1 287 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 SCAMP2O15127 329 aaKnown RBP11.73□□□□□ -0.53
VPREB3-201ENST00000248948 PEX11AO75192 247 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 ATP6AP2O75787 350 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 IGHG3P01860 377 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 ABCB1P08183 1280 aaPredicted RBP11.73□□□□□ -0.53
VPREB3-201ENST00000248948 BGNP21810 368 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 PIGAP37287 484 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 RPL14P50914 215 aaKnown RBP11.73□□□□□ -0.53
VPREB3-201ENST00000248948 FBXW4P57775 412 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 C21orf58P58505 322 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 MAGOHP61326 146 aaKnown RBP11.73□□□□□ -0.53
VPREB3-201ENST00000248948 PPIAP62937 165 aaKnown RBP11.73□□□□□ -0.53
VPREB3-201ENST00000248948 BST1Q10588 318 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 ZNF155Q12901 538 aaPredicted RBP11.73□□□□□ -0.53
VPREB3-201ENST00000248948 STX3Q13277 289 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 SNTA1Q13424 505 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 PDCD2Q16342 344 aaPredicted RBP11.73□□□□□ -0.53
VPREB3-201ENST00000248948 PRSS53Q2L4Q9 553 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 ARHGAP21Q5T5U3 1957 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 RPTNQ6XPR3 784 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 PRR22Q8IZ63 422 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 LIX1Q8N485 282 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 TMEM251Q8N6I4 163 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 NATD1Q8N6N6 113 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 ANKRD42Q8N9B4 389 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 CLHC1Q8NHS4 586 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 HGDQ93099 445 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 SLC35A4Q96G79 324 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 C3orf30Q96M34 536 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 PROK2Q9HC23 129 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 ZFP64Q9NPA5 681 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 NKIRAS1Q9NYS0 192 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 NOP53Q9NZM5 478 aaKnown RBP11.73□□□□□ -0.53
VPREB3-201ENST00000248948 ATP6V1HQ9UI12 483 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 MAPRE3Q9UPY8 281 aa11.73□□□□□ -0.53
VPREB3-201ENST00000248948 OR14I1A6ND48 311 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 TTC36A6NLP5 189 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 UPK1AO00322 258 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 PRRG2O14669 202 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 CDC40O60508 579 aaKnown RBP eCLIP11.72□□□□□ -0.53
VPREB3-201ENST00000248948 TRIM3O75382 744 aaPredicted RBP11.72□□□□□ -0.53
VPREB3-201ENST00000248948 WISP2O76076 250 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 LRATO95237 230 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 CT45A8P0DMV1 189 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 CT45A9P0DMV2 189 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 ELAVL4P26378 380 aaKnown RBP11.72□□□□□ -0.53
VPREB3-201ENST00000248948 PTGS2P35354 604 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 KRT20P35900 424 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 MAGEA5P43359 124 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 WDR4P57081 412 aaKnown RBP11.72□□□□□ -0.53
VPREB3-201ENST00000248948 MRPS22P82650 360 aaKnown RBP11.72□□□□□ -0.53
VPREB3-201ENST00000248948 HSF1Q00613 529 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 HSPB3Q12988 150 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 PTGR1Q14914 329 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 MLC1Q15049 377 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 C3AR1Q16581 482 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 ZNF385BQ569K4 471 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 CT45A2Q5DJT8 189 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 AGBL2Q5U5Z8 902 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 ANKRD26P1Q6NSI1 321 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 NPSR1Q6W5P4 371 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 TMEM64Q6YI46 380 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 NUP54Q7Z3B4 507 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 FGD2Q7Z6J4 655 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 FJX1Q86VR8 437 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 TRIM42Q8IWZ5 723 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 OR52N2Q8NGI0 321 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 OR5M3Q8NGP4 307 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 FAM57AQ8TBR7 257 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 PHF10Q8WUB8 498 aaKnown RBP11.72□□□□□ -0.53
VPREB3-201ENST00000248948 GFM2Q969S9 779 aaKnown RBP11.72□□□□□ -0.53
VPREB3-201ENST00000248948 NTNG2Q96CW9 530 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 ELP4Q96EB1 424 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 TMEM41AQ96HV5 264 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 RILPQ96NA2 401 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 COL21A1Q96P44 957 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 MS4A4EQ96PG1 132 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 PAIP2Q9BPZ3 127 aaKnown RBP11.72□□□□□ -0.53
VPREB3-201ENST00000248948 LMF2Q9BU23 707 aaKnown RBP11.72□□□□□ -0.53
VPREB3-201ENST00000248948 C1orf50Q9BV19 199 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 ANGPTL4Q9BY76 406 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 C20orf27Q9GZN8 174 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 ANKRA2Q9H9E1 313 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 ATAD3AQ9NVI7 634 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms