RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 STK35Q8TDR2 534 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 C7orf50Q9BRJ6 194 aaKnown RBP12.31□□□□□ -0.44
MSH2-201ENST00000233146 PIGMQ9H3S5 423 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 MED16Q9Y2X0 877 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 MAFBQ9Y5Q3 323 aaPredicted RBP12.31□□□□□ -0.44
MSH2-201ENST00000233146 ZNF236Q9UL36 1845 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 DSPPQ9NZW4 1301 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 COLCA2A8K830 154 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 PPM1DO15297 605 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 RAB36O95755 333 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 ANKRD34CP0C6C1 535 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 BCKDHAP12694 445 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 APEHP13798 732 aaKnown RBP12.31□□□□□ -0.44
MSH2-201ENST00000233146 LAG3P18627 525 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 AP1S1P61966 158 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 NEIL3Q8TAT5 605 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 SPPL2AQ8TCT8 520 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 HASPINQ8TF76 798 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 CHFRQ96EP1 664 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 SSX3Q99909 188 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 VRK1Q99986 396 aaPredicted RBP12.31□□□□□ -0.44
MSH2-201ENST00000233146 POLDIP3Q9BY77 421 aaKnown RBP12.31□□□□□ -0.44
MSH2-201ENST00000233146 ATP13A1Q9HD20 1204 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 CHMP1AQ9HD42 196 aaPredicted RBP12.31□□□□□ -0.44
MSH2-201ENST00000233146 TEX10Q9NXF1 929 aaPredicted RBP12.31□□□□□ -0.44
MSH2-201ENST00000233146 HLA-DQB2P05538 268 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 ACPPP15309 386 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 ZNF44P15621 663 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 GKP32189 559 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 LIMS1P48059 325 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 RAB4BP61018 213 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 MAT1AQ00266 395 aaKnown RBP12.3□□□□□ -0.44
MSH2-201ENST00000233146 E2F1Q01094 437 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 HMGCS1Q01581 520 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 DUOXA1Q1HG43 343 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 OR2G6Q5TZ20 316 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 TMEM185AQ8NFB2 350 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 ART5Q96L15 291 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 CDT1Q9H211 546 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 CBLCQ9ULV8 474 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 CARHSP1Q9Y2V2 147 aaKnown RBP12.3□□□□□ -0.44
MSH2-201ENST00000233146 PCDHGC4Q9Y5F7 938 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 PCDHGA5Q9Y5G8 931 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 PCDHGA1Q9Y5H4 931 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 CHD5Q8TDI0 1954 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 TGM5O43548 720 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 SPDEFO95238 335 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 HEXBP07686 556 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 C1SP09871 688 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 ZNF865P0CJ78 1059 aaPredicted RBP12.3□□□□□ -0.44
MSH2-201ENST00000233146 CPN1P15169 458 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 ADORA2BP29275 332 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 CHI3L1P36222 383 aaPredicted RBP12.3□□□□□ -0.44
MSH2-201ENST00000233146 SLC1A3P43003 542 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 MBTPS1Q14703 1052 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 IKBIPQ70UQ0 350 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 BCDIN3DQ7Z5W3 292 aaKnown RBP12.3□□□□□ -0.44
MSH2-201ENST00000233146 MARCH9Q86YJ5 346 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 STK40Q8N2I9 435 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 GAS2L1Q99501 681 aaPredicted RBP12.3□□□□□ -0.44
MSH2-201ENST00000233146 EDEM2Q9BV94 578 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 GGACTQ9BVM4 153 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 EGLN1Q9GZT9 426 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 WDR26Q9H7D7 661 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 TESQ9UGI8 421 aaKnown RBP12.3□□□□□ -0.44
MSH2-201ENST00000233146 PLEKHA6Q9Y2H5 1048 aa12.3□□□□□ -0.44
MSH2-201ENST00000233146 ANKRD31Q8N7Z5 1873 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 A0A1B0GVC2 190 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 LRIT2A6NDA9 550 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 A6NIN4 97 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 HEPACAM2A8MVW5 462 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 SC5DO75845 299 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 MT-ND4P03905 459 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 NR2F6P10588 404 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 MPGP29372 298 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 UBE2IP63279 158 aaKnown RBP12.29□□□□□ -0.44
MSH2-201ENST00000233146 B3GLCTQ6Y288 498 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 GOLGA7Q7Z5G4 137 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 HDDC3Q8N4P3 179 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 GATAD2BQ8WXI9 593 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 LRTM1Q9HBL6 345 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 NFKBIL1Q9UBC1 381 aaPredicted RBP12.29□□□□□ -0.44
MSH2-201ENST00000233146 FBXW11Q9UKB1 542 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 SNX10Q9Y5X0 201 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 A0A1B0GUH1 482 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 C1orf196B1AJZ1 125 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 PRR23D1E9PI22 279 aaPredicted RBP12.29□□□□□ -0.44
MSH2-201ENST00000233146 SLC34A2O95436 690 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 GASTP01350 101 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 IFNGP01579 166 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 CD3GP09693 182 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 PRR23D2P0DMB1 279 aaPredicted RBP12.29□□□□□ -0.44
MSH2-201ENST00000233146 TNFRSF1BP20333 461 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 HTR5AP47898 357 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 OCLNQ16625 522 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 SLC10A6Q3KNW5 377 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 GPRC6AQ5T6X5 926 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 SLC22A10Q63ZE4 541 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 CASP12Q6UXS9 341 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 GPSM1Q86YR5 675 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms