RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 THAP4Q8WY91 577 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 ATOH8Q96SQ7 321 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 TRIM8Q9BZR9 551 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 SEMA6CQ9H3T2 930 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 SDR39U1Q9NRG7 319 aaPredicted RBP9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 KCMF1Q9P0J7 381 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 SLC35A3Q9Y2D2 325 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 LAMB2P55268 1798 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 FOXE1O00358 373 aaPredicted RBP9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 KCNK5O95279 499 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 SDC1P18827 310 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 NDUFV2P19404 249 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 F8A1P23610 371 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 GALK2Q01415 458 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 MALLQ13021 153 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 HMBOX1Q6NT76 420 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 RFLNAQ6ZTI6 216 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 LINGO2Q7L985 606 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 TMEM17Q86X19 198 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 TREML1Q86YW5 311 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 LIX1LQ8IVB5 337 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 GOLM1Q8NBJ4 401 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 OR51Q1Q8NH59 317 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 HAVCR1Q96D42 359 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 SLC45A3Q96JT2 553 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 ACPTQ9BZG2 426 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 ZDHHC5Q9C0B5 715 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 DNAJC27Q9NZQ0 273 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 PTBP2Q9UKA9 531 aaKnown RBP9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 LAMA4Q16363 1823 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 EME2A4GXA9 379 aaPredicted RBP9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 FMO6PO60774 539 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 UBL4AP11441 157 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 SCN1BQ07699 218 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 POU4F2Q12837 409 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 COL9A2Q14055 689 aaPredicted RBP9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 C6orf132Q5T0Z8 1188 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 FTMTQ8N4E7 242 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 OR2L3Q8NG85 312 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 OR52R1Q8NGF1 315 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 ZFPM2Q8WW38 1151 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 BORCS5Q969J3 196 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 CIDECQ96AQ7 238 aaPredicted RBP9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 FER1L6-AS2Q96M78 137 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 DCBLD2Q96PD2 775 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 TOR3AQ9H497 397 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 LTB4R2Q9NPC1 389 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 FGF21Q9NSA1 209 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 MCTS1Q9ULC4 181 aaKnown RBP9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 TNFRSF21O75509 655 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 CPNE6O95741 557 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 OR1D4P47884 311 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 LAPTM4AQ15012 233 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 OLFML2AQ68BL7 652 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 FGF14Q92915 247 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 PHF12Q96QT6 1004 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 SORBS1Q9BX66 1292 aaKnown RBP9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 SOX17Q9H6I2 414 aaPredicted RBP9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 CPMP14384 443 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 OGFOD2Q6N063 350 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 ZNF227Q86WZ6 799 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 ERI1Q8IV48 349 aaKnown RBP9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 PRR22Q8IZ63 422 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 PIK3R3Q92569 461 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 SGCDQ92629 289 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 ITPAQ9BY32 194 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 EVA1AQ9H8M9 152 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 IL21Q9HBE4 155 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 CCM2LQ9NUG4 571 aaPredicted RBP9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 BOKQ9UMX3 212 aaPredicted RBP9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 SOCS2O14508 198 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 MMP2P08253 660 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 ADAM15Q13444 863 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 OR51G2Q8NGK0 314 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 SLC41A3Q96GZ6 507 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 CLEC4EQ9ULY5 219 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 SLC7A11Q9UPY5 501 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 TFECO14948 347 aaPredicted RBP9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 SLITRK5O94991 958 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 GGT1P19440 569 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 TCN2P20062 427 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 NR4A1P22736 598 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 HTR3AP46098 478 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 HENMT1Q5T8I9 393 aaKnown RBP9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 FAM180BQ6P0A1 224 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 ADIPOR2Q86V24 386 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 SNIP1Q8TAD8 396 aaKnown RBP9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 DNAJA3Q96EY1 480 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 DHRS4Q9BTZ2 278 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 CST11Q9H112 138 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 SLAMF7Q9NQ25 335 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 PADI1Q9ULC6 663 aa9.79□□□□□ -0.84
NIPAL3-201ENST00000003912 GRXCR2A6NFK2 248 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 HPRP00739 348 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 IGFBP6P24592 240 aaPredicted RBP9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 GDF1P27539 372 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 IMPA1P29218 277 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 GGTA1PQ4G0N0 100 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 EEF1A1P5Q5VTE0 462 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 GARNL3Q5VVW2 1013 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms