RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Ccdc54Q9DAL3 329 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr632Q9EPN9 317 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Prmt1Q9JIF0 371 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Slfn1Q9Z0I7 337 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Zfp114B2RRA8 586 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm8973D3YX71 104 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Wdfy1E9Q4P1 410 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr913E9Q716 312 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr66F8VQ01 311 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm8926L7MUE8 181 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Ppt1O88531 306 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 En2P09066 324 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 CtsdP18242 410 aaKnown RBP9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Rap2bP61226 183 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Sec61a1P61620 476 aaKnown RBP9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Pax6P63015 422 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Il12rb2P97378 874 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 KcnrgQ2TUM3 264 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Adam5Q3TTE0 751 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Lcp1Q61233 627 aaKnown RBP9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Tgfbr2Q62312 592 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Inppl1Q6P549 1257 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Snx31Q6P8Y7 439 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Tas2r131Q7M708 310 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr1062Q7TR71 315 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Scml4Q80VG1 408 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Eif4e2Q8BMB3 245 aaKnown RBP9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Steap2Q8BWB6 489 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 BtdQ8CIF4 520 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Mrpl38Q8K2M0 380 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Themis3Q9CU24 569 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 2310003L06RikQ9CV82 495 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Mettl9Q9EPL4 318 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Mrpl39Q9JKF7 336 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Dnajb7Q9QYI8 312 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Zfp111Q9R164 701 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Cyp2ab1S4R196 498 aa9.25□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm21865A0A087WRL2 222 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm5072A2AHM1 344 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Tsga10ipF7A1F0 157 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm21797J3QNW5 180 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm3159K7N760 267 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr1154L7MU57 310 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Vmn2r8L7N472 848 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 RfngO09009 332 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 GclmO09172 274 aaKnown RBP9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Pld3O35405 488 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 P01657 111 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 CryaaP24622 196 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 LalbaP29752 143 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm2016Q3TQZ4 144 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Lclat1Q3UN02 376 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Rbbp7Q60973 425 aaKnown RBP9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Cd53Q61451 219 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Lrrn1Q61809 716 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Fam149b1Q6NSV7 578 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Trim62Q80V85 475 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Pramel7Q810Y8 479 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Vrk2Q8BN21 503 aaKnown RBP9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Med19Q8C1S0 244 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Q8C4X7 151 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Phf21bQ8C966 487 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Abi1Q8CBW3 481 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 HinfpQ8K1K9 503 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Ints14Q8R3P6 515 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Naa40Q8VE10 237 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr54Q8VFE6 313 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr1501Q8VFQ3 315 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gtpbp8Q9CY28 285 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Dydc2Q9D3X8 139 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Nqo2Q9JI75 231 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Trip6Q9Z1Y4 480 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Lrit3W8DXL4 681 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 A26c2A0A140LHE4 291 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr1193A2AV13 318 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Dlgap4B1AZP2 992 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm6576F6YTZ4 274 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Zfp846G3X996 541 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm2075J3QMW5 144 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Capn1O35350 713 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Klf9O35739 244 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Mbl1P39039 239 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Elk1P41969 429 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Sf3b6P59708 125 aaKnown RBP9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Rps25P62852 125 aaKnown RBP9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Casp7P97864 303 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 D13Ertd608eQ3UPR8 151 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 EngQ63961 653 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Zfp429Q7M6Y0 485 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Chrnb3Q8BMN3 464 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gpr61Q8C010 449 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Tmem163Q8C996 288 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Dync2li1Q8K0T2 351 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Ly6g5cQ8K1T5 149 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 GrpQ8R1I2 146 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 SpartQ8R1X6 671 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Vmn1r74Q8R290 304 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Pcdhga12Q91XY7 932 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Pcdhac2Q91Y09 1006 aa9.24□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Npm3Q9CPP0 175 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms