RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Elk1P41969 429 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Lman2lP59481 347 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 NrtnP97463 195 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Pde12Q3TIU4 608 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Mup20Q5FW60 181 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Slc10a7Q5PT53 340 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 NoboxQ8VIH1 527 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gpr146Q99LE2 333 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Sorcs2Q9EPR5 1159 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 NpvfQ9ESQ8 188 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Adamdec1Q9R0X2 467 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Dio2Q9Z1Y9 266 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm7951E9Q0A2 213 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Aldh3b2E9Q3E1 479 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm6482F6YHC1 213 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm17124F6ZIG1 213 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Nkx1-1G3UXB3 402 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 TstP52196 297 aaKnown RBP15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 DsppP97399 934 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Serac1Q3U213 654 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Sec24aQ3U2P1 1090 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Nrsn2Q5HZK2 202 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Tnfaip3Q60769 775 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 RhocQ62159 193 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 DraxinQ6PAL1 343 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Olfr1322Q7TQW3 310 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm9758Q80ZT2 255 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Klf8Q8BLM0 355 aaKnown RBP15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Olfr1276Q8VF40 312 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Olfr541Q8VGM0 312 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 NansQ99J77 359 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 IqchQ9D2K4 1071 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Hoga1Q9DCU9 321 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Ccnl2Q9JJA7 518 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Mrgpra2aA0A0R4J1Z0 331 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Olfr228A0A1L1SR98 313 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Olfr420E9Q4G0 321 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 NgpO08692 167 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Prl7a1O54830 266 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Smpd2O70572 419 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 P18533 117 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Klkb1P26262 638 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Bmp8aP34821 399 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Sox14Q04892 240 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Ap5b1Q3TAP4 876 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Ctu2Q3U308 514 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Ephx3Q3V1F8 367 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Spin4Q8K1L2 249 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Rab40bQ8VHP8 278 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Lap3Q9CPY7 519 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Ap3s1Q9DCR2 193 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Cep350E9Q309 3095 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Zfp952B0V2W4 504 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Lancl1O89112 399 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Zp2P20239 713 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Rab8bP61028 207 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Ap1s1P61967 158 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 VaspP70460 375 aaKnown RBP15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Fam69cQ8BQT2 410 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Pp2d1Q8BVT6 620 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Camk2gQ923T9 529 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Osbpl3Q9DBS9 855 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gstz1Q9WVL0 216 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 BC049352E9Q2Z6 85 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 H2-Q7P14429 334 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Prph2P15499 346 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Hsd3b3P26150 373 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Galk2Q68FH4 458 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Rae1Q8C570 368 aaKnown RBP15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Mbtps2Q8CHX6 515 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Tmem268Q8R239 342 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Dus3lQ91XI1 637 aaKnown RBP15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Pdzk1ip1Q9CQH0 114 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Fam45aQ9D8N2 357 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Hipk2Q9QZR5 1196 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Srebf1Q9WTN3 1134 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Eml5Q8BQM8 1977 aa15.96■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Tbx6P70327 436 aa15.96■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Epha4Q03137 986 aa15.96■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Tmem163Q8C996 288 aa15.96■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Akr1c20Q8VC77 323 aa15.96■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Olfr1469Q8VFW5 309 aa15.96■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Pcdhga9Q91XX9 932 aa15.96■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Akirin1Q99LF1 191 aa15.96■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Med30Q9CQI9 178 aa15.96■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Fam3bQ9D309 235 aa15.96■□□□□ 0.14
Ctcf-201ENSMUST00000005841 UqcrbQ9D855 111 aa15.96■□□□□ 0.14
Ctcf-201ENSMUST00000005841 A0A286YCD0 109 aa15.95■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm17555F6U8B9 371 aa15.95■□□□□ 0.14
Ctcf-201ENSMUST00000005841 BhmtO35490 407 aaKnown RBP15.95■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Orm1Q60590 207 aa15.95■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Snx31Q6P8Y7 439 aa15.95■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Defb34Q7TNV8 81 aa15.95■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Kctd7Q8BJK1 289 aa15.95■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Olfr572Q8VGZ3 318 aa15.95■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Ppil3Q9D6L8 161 aa15.95■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Mfsd2aQ9DA75 534 aa15.95■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Slc7a7Q9Z1K8 510 aa15.95■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Prr23a2D3YWX5 253 aa15.95■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Angpt1O08538 498 aa15.95■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms