RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	AKAP14	Q86UN6	197 aa		15.84	■□□□□ 0.13
PHGDH-223	ENST00000641597	GATAD2B	Q8WXI9	593 aa		15.84	■□□□□ 0.13
PHGDH-223	ENST00000641597	ZNF582	Q96NG8	517 aa	Predicted RBP	15.84	■□□□□ 0.13
PHGDH-223	ENST00000641597	CAMK1G	Q96NX5	476 aa		15.84	■□□□□ 0.13
PHGDH-223	ENST00000641597	DCLRE1C	Q96SD1	692 aa	Known RBP	15.84	■□□□□ 0.13
PHGDH-223	ENST00000641597	TOR4A	Q9NXH8	423 aa		15.84	■□□□□ 0.13
PHGDH-223	ENST00000641597	ZFR2	Q9UPR6	939 aa	Known RBP	15.84	■□□□□ 0.13
PHGDH-223	ENST00000641597	A3GALT2	U3KPV4	340 aa		15.84	■□□□□ 0.13
PHGDH-223	ENST00000641597		V9GYH0	126 aa		15.84	■□□□□ 0.13
PHGDH-223	ENST00000641597	TRBV23OR9-2	A0A075B6M9	112 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	FCMR	O60667	390 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	CDRT1	O95170	752 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	AIFM1	O95831	613 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	SOX18	P35713	384 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	MC3R	P41968	323 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	CHRNE	Q04844	493 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	RPA4	Q13156	261 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	SF3B4	Q15427	424 aa	Known RBP eCLIP	15.83	■□□□□ 0.13	2e-8	■■■■■ 38.4
PHGDH-223	ENST00000641597	ZNF362	Q5T0B9	420 aa	Predicted RBP	15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	ACOT4	Q8N9L9	421 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	OR9A2	Q8NGT5	310 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	OR2A14	Q96R47	310 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	RACGAP1	Q9H0H5	632 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	WDR26	Q9H7D7	661 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	CHST2	Q9Y4C5	530 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597	UGT2A1	Q9Y4X1	527 aa		15.83	■□□□□ 0.13
PHGDH-223	ENST00000641597		A0A087WUU8	490 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	HTR3E	A5X5Y0	456 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	DNAJB6	O75190	326 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	ZIC2	O95409	532 aa	Predicted RBP	15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	NFATC1	O95644	943 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	PIP	P12273	146 aa	Predicted RBP	15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	CXCR2	P25025	360 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	TRHR	P34981	398 aa	Predicted RBP	15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	CASP3	P42574	277 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	GSTM5	P46439	218 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	RHAG	Q02094	409 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	SNAPC1	Q16533	368 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	TMEM240	Q5SV17	173 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	PRICKLE2	Q7Z3G6	844 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	SLC30A8	Q8IWU4	369 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	MS4A6E	Q96DS6	147 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	NDOR1	Q9UHB4	597 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	ENOPH1	Q9UHY7	261 aa		15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	SPIN1	Q9Y657	262 aa	Predicted RBP	15.83	■□□□□ 0.12
PHGDH-223	ENST00000641597	PDZK1P1	A8MUH7	402 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	MYL12B	O14950	172 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	PDE9A	O76083	593 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	PSMA1	P25786	263 aa	Known RBP	15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	PEBP1	P30086	187 aa	Known RBP	15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	AVPR1B	P47901	424 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	SEC13	P55735	322 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	RPS25	P62851	125 aa	Known RBP	15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	ARHGAP19	Q14CB8	494 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	TMEM201	Q5SNT2	666 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	PSRC1	Q6PGN9	363 aa	Predicted RBP	15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	ABI3BP	Q7Z7G0	1075 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	HDDC3	Q8N4P3	179 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	KCT2	Q8NC54	265 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	IL17RD	Q8NFM7	739 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	OR52E1	Q8NGJ3	308 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	FAM46A	Q96IP4	442 aa	Known RBP	15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	TXNDC15	Q96J42	360 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	PLA2G2F	Q9BZM2	168 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	PRDM7	Q9NQW5	492 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	RPL36	Q9Y3U8	105 aa	Known RBP	15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597		A0A1W2PRQ8	180 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597		A6NL46	340 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	C1QTNF3-AMACR	E9PGA6	284 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	TFEC	O14948	347 aa	Predicted RBP	15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	EML2	O95834	649 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	PTTG1	O95997	202 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	MSL3P1	P0C860	447 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	GJA4	P35212	333 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	KRT33B	Q14525	404 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	KIAA1161	Q6NSJ0	714 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	MND1	Q9BWT6	205 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	SEMA4G	Q9NTN9	838 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	ACSS1	Q9NUB1	689 aa	Predicted RBP	15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	TMEM74B	Q9NUR3	256 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	NDUFB11	Q9NX14	153 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	GPSM3	Q9Y4H4	160 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	ASB4	Q9Y574	426 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	KAT7	O95251	611 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	OXSR1	O95747	527 aa	Predicted RBP	15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	RFX2	P48378	723 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	GAS1	P54826	345 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	HNRNPA0	Q13151	305 aa	Known RBP	15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	TIMM50	Q3ZCQ8	353 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	SLC30A6	Q6NXT4	461 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	TMEM53	Q6P2H8	277 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	LHFPL3	Q86UP9	236 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	OR4N5	Q8IXE1	308 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	SMARCD2	Q92925	531 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	HDAC8	Q9BY41	377 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	ABCB9	Q9NP78	766 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	TXNL4B	Q9NX01	149 aa	Known RBP	15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	APOBEC3B	Q9UH17	382 aa	Known RBP	15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	PCDHGA4	Q9Y5G9	962 aa		15.82	■□□□□ 0.12
PHGDH-223	ENST00000641597	CENPVL1	A0A0U1RR11	272 aa		15.81	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms