RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 SLC25A42Q86VD7 318 aa2.53□□□□□ -2
ATM-230ENST00000640388 ZSCAN30Q86W11 494 aa2.53□□□□□ -2
ATM-230ENST00000640388 UNC45BQ8IWX7 931 aa2.53□□□□□ -2
ATM-230ENST00000640388 PHC2Q8IXK0 858 aa2.53□□□□□ -2
ATM-230ENST00000640388 SLC39A11Q8N1S5 342 aa2.53□□□□□ -2
ATM-230ENST00000640388 OR9Q2Q8NGE9 314 aa2.53□□□□□ -2
ATM-230ENST00000640388 SSC4DQ8WTU2 575 aa2.53□□□□□ -2
ATM-230ENST00000640388 TOMM40LQ969M1 308 aa2.53□□□□□ -2
ATM-230ENST00000640388 CLDN23Q96B33 292 aa2.53□□□□□ -2
ATM-230ENST00000640388 AK8Q96MA6 479 aa2.53□□□□□ -2
ATM-230ENST00000640388 MGME1Q9BQP7 344 aa2.53□□□□□ -2
ATM-230ENST00000640388 DESI2Q9BSY9 194 aa2.53□□□□□ -2
ATM-230ENST00000640388 ALKBH7Q9BT30 221 aaPredicted RBP2.53□□□□□ -2
ATM-230ENST00000640388 MLPHQ9BV36 600 aaPredicted RBP2.53□□□□□ -2
ATM-230ENST00000640388 THUMPD3Q9BV44 507 aaKnown RBP2.53□□□□□ -2
ATM-230ENST00000640388 C10orf88Q9H8K7 445 aa2.53□□□□□ -2
ATM-230ENST00000640388 COPS7BQ9H9Q2 264 aaPredicted RBP2.53□□□□□ -2
ATM-230ENST00000640388 RPF1Q9H9Y2 349 aaKnown RBP2.53□□□□□ -2
ATM-230ENST00000640388 C3orf14Q9HBI5 128 aa2.53□□□□□ -2
ATM-230ENST00000640388 CD209Q9NNX6 404 aa2.53□□□□□ -2
ATM-230ENST00000640388 RAB9BQ9NP90 201 aa2.53□□□□□ -2
ATM-230ENST00000640388 IARS2Q9NSE4 1012 aaKnown RBP2.53□□□□□ -2
ATM-230ENST00000640388 EXOC1Q9NV70 894 aa2.53□□□□□ -2
ATM-230ENST00000640388 GTSE1Q9NYZ3 720 aa2.53□□□□□ -2
ATM-230ENST00000640388 MTRRQ9UBK8 725 aa2.53□□□□□ -2
ATM-230ENST00000640388 KLK11Q9UBX7 282 aa2.53□□□□□ -2
ATM-230ENST00000640388 LEF1Q9UJU2 399 aaPredicted RBP2.53□□□□□ -2
ATM-230ENST00000640388 LIPT1Q9Y234 373 aa2.53□□□□□ -2
ATM-230ENST00000640388 NCKAP1Q9Y2A7 1128 aa2.53□□□□□ -2
ATM-230ENST00000640388 SNX5Q9Y5X3 404 aa2.53□□□□□ -2
ATM-230ENST00000640388 STYXL1Q9Y6J8 313 aa2.53□□□□□ -2
ATM-230ENST00000640388 PRKDCP78527 4128 aaKnown RBP2.53□□□□□ -2.01
ATM-230ENST00000640388 TACC2O95359 2948 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.52□□□□□ -2.017e-8■■■□□ 16.4
ATM-230ENST00000640388 ASTN1O14525 1302 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 NKX6-3A6NJ46 265 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 FAM86B1E9PN63 330 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 FLRT2O43155 660 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 FCGR3BO75015 233 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 N4BP1O75113 896 aaKnown RBP2.52□□□□□ -2.01
ATM-230ENST00000640388 DUSP11O75319 330 aaKnown RBP2.52□□□□□ -2.01
ATM-230ENST00000640388 LRCH4O75427 683 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 PGLSO95336 258 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 SLU7O95391 586 aaKnown RBP2.52□□□□□ -2.01
ATM-230ENST00000640388 MT-ND2P03891 347 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 GBAP04062 536 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 HOXD4P09016 255 aaPredicted RBP2.52□□□□□ -2.01
ATM-230ENST00000640388 FAM86B2P0C5J1 330 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 PCP11498 1178 aaKnown RBP2.52□□□□□ -2.01
ATM-230ENST00000640388 HOXB8P17481 243 aaPredicted RBP2.52□□□□□ -2.01
ATM-230ENST00000640388 IL4RP24394 825 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 PSMB4P28070 264 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 PKLRP30613 574 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 RPS9P46781 194 aaKnown RBP2.52□□□□□ -2.01
ATM-230ENST00000640388 ATP4BP51164 291 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 NAGLUP54802 743 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 CCNA1P78396 465 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 SCN1BQ07699 218 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 PEX6Q13608 980 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 TYSND1Q2T9J0 566 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 TWISTNBQ3B726 338 aaPredicted RBP2.52□□□□□ -2.01
ATM-230ENST00000640388 HIGD2BQ4VC39 106 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 SPANXN4Q5MJ08 99 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 SLC25A30Q5SVS4 291 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 IYDQ6PHW0 289 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 TIPARPQ7Z3E1 657 aaKnown RBP2.52□□□□□ -2.01
ATM-230ENST00000640388 RNF130Q86XS8 419 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 HPS6Q86YV9 775 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 LINC00612Q8N6U2 182 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 CCDC185Q8N715 623 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 OCC1Q8TAD7 63 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 SPPL2AQ8TCT8 520 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.52□□□□□ -2.01
ATM-230ENST00000640388 ST6GALNAC6Q969X2 333 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 ATF6BQ99941 703 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 FERMT1Q9BQL6 677 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 UBAC1Q9BSL1 405 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 PAPOLGQ9BWT3 736 aaKnown RBP2.52□□□□□ -2.01
ATM-230ENST00000640388 CHCHD3Q9NX63 227 aaKnown RBP2.52□□□□□ -2.01
ATM-230ENST00000640388 GPR83Q9NYM4 423 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 TRMT112Q9UI30 125 aaKnown RBP2.52□□□□□ -2.01
ATM-230ENST00000640388 MRPS18CQ9Y3D5 142 aaKnown RBP2.52□□□□□ -2.01
ATM-230ENST00000640388 KNSTRNQ9Y448 316 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 KLK4Q9Y5K2 254 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 WNK1Q9H4A3 2382 aa2.52□□□□□ -2.01
ATM-230ENST00000640388 KIAA1109Q2LD37 5005 aa2.51□□□□□ -2.01
ATM-230ENST00000640388 MROH7-TTC4A0A0A0MT08 1334 aa2.51□□□□□ -2.01
ATM-230ENST00000640388 ZMYM6O95789 1325 aa2.51□□□□□ -2.01
ATM-230ENST00000640388 CLSPNQ9HAW4 1339 aa2.51□□□□□ -2.01
ATM-230ENST00000640388 MYH7BA7E2Y1 1941 aa2.51□□□□□ -2.01
ATM-230ENST00000640388 LOXHD1Q8IVV2 1947 aa2.51□□□□□ -2.01
ATM-230ENST00000640388 ARHGEF37A1IGU5 675 aa2.51□□□□□ -2.01
ATM-230ENST00000640388 FAM149AA5PLN7 773 aa2.51□□□□□ -2.01
ATM-230ENST00000640388 HTR3EA5X5Y0 456 aa2.51□□□□□ -2.01
ATM-230ENST00000640388 TRIM64A6NGJ6 449 aa2.51□□□□□ -2.01
ATM-230ENST00000640388 TRIM64BA6NI03 449 aa2.51□□□□□ -2.01
ATM-230ENST00000640388 NPIPA3F8WFD2 350 aa2.51□□□□□ -2.01
ATM-230ENST00000640388 RNF103O00237 685 aa2.51□□□□□ -2.01
ATM-230ENST00000640388 IFIT3O14879 490 aaKnown RBP2.51□□□□□ -2.01
ATM-230ENST00000640388 PGRMC2O15173 223 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms