RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 C6orf132Q5T0Z8 1188 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 IGFN1Q86VF2 1251 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 NLGN4XQ8N0W4 816 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 SLC44A3Q8N4M1 653 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 B3GNT7Q8NFL0 401 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 OR6N2Q8NGY6 317 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 THAP3Q8WTV1 239 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-216ENST00000639300 PLAC1Q9HBJ0 212 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 TBC1D24Q9ULP9 559 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 CSNK1G3Q9Y6M4 447 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 EIF1AYO14602 144 aaKnown RBP13.67□□□□□ -0.22
SCARB2-216ENST00000639300 YES1P07947 543 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 ITIH1P19827 911 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 SOX3P41225 446 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 SOX9P48436 509 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 HSF5Q4G112 596 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-216ENST00000639300 Q8N402 240 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 GAB3Q8WWW8 586 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 FATE1Q969F0 183 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 PEX11GQ96HA9 241 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 UNC119BA6NIH7 251 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 ABLIM3O94929 683 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 JUNDP17535 347 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 GRPRP30550 384 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 GGT2P36268 569 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 RPS15AP62244 130 aaKnown RBP13.67□□□□□ -0.22
SCARB2-216ENST00000639300 NR4A3Q92570 626 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 NSMAFQ92636 917 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 TGM7Q96PF1 710 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 NELL2Q99435 816 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 EVA1BQ9NVM1 165 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 PIAS3Q9Y6X2 628 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 MCM3APO60318 1980 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 SOBPA7XYQ1 873 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 ZNF670-ZNF695F2Z2N8 137 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 NKX2-5P52952 324 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-216ENST00000639300 KEAP1Q14145 624 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 SPRED1Q7Z699 444 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 ANKRD13BQ86YJ7 626 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 EPYCQ99645 322 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 POLDIP3Q9BY77 421 aaKnown RBP13.67□□□□□ -0.22
SCARB2-216ENST00000639300 ZNF224Q9NZL3 707 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 GRHPRQ9UBQ7 328 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 ENPP5Q9UJA9 477 aa13.67□□□□□ -0.22
SCARB2-216ENST00000639300 TLX3O43711 291 aaPredicted RBP13.66□□□□□ -0.22
SCARB2-216ENST00000639300 AHSA1O95433 338 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 RNH1P13489 461 aaKnown RBP13.66□□□□□ -0.22
SCARB2-216ENST00000639300 PCSK6P29122 969 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 RAB30Q15771 203 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 BORAQ6PGQ7 559 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 TMPRSS9Q7Z410 1059 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 TRIM46Q7Z4K8 759 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 CPOQ8IVL8 374 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 GID4Q8IVV7 300 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 OR4K13Q8NH42 304 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 LINC01599Q8WXQ3 324 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 SAMD8Q96LT4 415 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 TOX2Q96NM4 488 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 TPSD1Q9BZJ3 242 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 DPAGT1Q9H3H5 408 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 SH3D21A4FU49 640 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 CAPNS1P04632 268 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 GNSP15586 552 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 C4orf46Q504U0 113 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 PNCKQ6P2M8 343 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 TBPL2Q6SJ96 375 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 LCTLQ6UWM7 567 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 OR8H3Q8N146 312 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 OR2L2Q8NH16 312 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 APOBEC3BQ9UH17 382 aaKnown RBP13.66□□□□□ -0.22
SCARB2-216ENST00000639300 DNMT3AQ9Y6K1 912 aaPredicted RBP13.66□□□□□ -0.22
SCARB2-216ENST00000639300 NPIPA5A0A0B4J1W7 369 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 NPIPA7E9PJI5 369 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 SMAD9O15198 467 aaKnown RBP13.66□□□□□ -0.22
SCARB2-216ENST00000639300 NPIPA8P0DM63 369 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 SPCS2Q15005 226 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 ZNF550Q7Z398 422 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 MYNNQ9NPC7 610 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 A0A0G2JPF8 293 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 FUOMA2VDF0 154 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 HNRNPCL3B7ZW38 293 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 HNRNPCL4P0DMR1 293 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 GP1BBP13224 206 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 CR2P20023 1033 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 ACVR1Q04771 509 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 ZNF691Q5VV52 312 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 FBXO46Q6PJ61 603 aaPredicted RBP13.66□□□□□ -0.22
SCARB2-216ENST00000639300 B3GNT8Q7Z7M8 397 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 ANKK1Q8NFD2 765 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 OR52E1Q8NGJ3 308 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 HCAR2Q8TDS4 363 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 UBE2FQ969M7 185 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 MTHFD2LQ9H903 347 aaPredicted RBP13.66□□□□□ -0.22
SCARB2-216ENST00000639300 SLC2A4RGQ9NR83 387 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 CCDC59Q9P031 241 aaKnown RBP13.66□□□□□ -0.22
SCARB2-216ENST00000639300 HSFX1Q9UBD0 423 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 CDH10Q9Y6N8 788 aa13.66□□□□□ -0.22
SCARB2-216ENST00000639300 LOC100509620A0A075B734 347 aa13.65□□□□□ -0.22
SCARB2-216ENST00000639300 TMEM202A6NGA9 273 aa13.65□□□□□ -0.22
SCARB2-216ENST00000639300 TARM1B6A8C7 271 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms