RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ZNHIT1O43257 154 aa20.06■□□□□ 0.8
SCN1B-206ENST00000638536 MAPK1P28482 360 aa20.06■□□□□ 0.8
SCN1B-206ENST00000638536 NTSP30990 170 aa20.06■□□□□ 0.8
SCN1B-206ENST00000638536 FRKP42685 505 aaPredicted RBP20.06■□□□□ 0.8
SCN1B-206ENST00000638536 FBXW4P57775 412 aa20.06■□□□□ 0.8
SCN1B-206ENST00000638536 HSPB3Q12988 150 aa20.06■□□□□ 0.8
SCN1B-206ENST00000638536 MAVSQ7Z434 540 aa20.06■□□□□ 0.8
SCN1B-206ENST00000638536 WDR75Q8IWA0 830 aaKnown RBP20.06■□□□□ 0.8
SCN1B-206ENST00000638536 RIMKLAQ8IXN7 391 aa20.06■□□□□ 0.8
SCN1B-206ENST00000638536 ST6GALNAC3Q8NDV1 305 aa20.06■□□□□ 0.8
SCN1B-206ENST00000638536 DNAJB8Q8NHS0 232 aa20.06■□□□□ 0.8
SCN1B-206ENST00000638536 ZNF764Q96H86 408 aaPredicted RBP20.06■□□□□ 0.8
SCN1B-206ENST00000638536 MAGED4Q96JG8 741 aa20.06■□□□□ 0.8
SCN1B-206ENST00000638536 PROK2Q9HC23 129 aa20.06■□□□□ 0.8
SCN1B-206ENST00000638536 ATP6V1HQ9UI12 483 aa20.06■□□□□ 0.8
SCN1B-206ENST00000638536 CHCHD2Q9Y6H1 151 aaPredicted RBP20.06■□□□□ 0.8
SCN1B-206ENST00000638536 UTP20O75691 2785 aaKnown RBP20.06■□□□□ 0.8
SCN1B-206ENST00000638536 UPK1AO00322 258 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 SDHDO14521 159 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 CRYABP02511 175 aaKnown RBP20.05■□□□□ 0.8
SCN1B-206ENST00000638536 LAMP1P11279 417 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 PRPS2P11908 318 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 EDN3P14138 238 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 ABCD3P28288 659 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 PIGAP37287 484 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 CORO7P57737 925 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 KCNK10P57789 538 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 NPSR1Q6W5P4 371 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 LARP4Q71RC2 724 aaKnown RBP eCLIP20.05■□□□□ 0.8
SCN1B-206ENST00000638536 SIAH3Q8IW03 269 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 GOLGA6L1Q8N7Z2 621 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 GOLM1Q8NBJ4 401 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 FAM13CQ8NE31 585 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 ELP4Q96EB1 424 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 SGCZQ96LD1 299 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 VSTM2LQ96N03 204 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 WDR55Q9H6Y2 383 aaPredicted RBP20.05■□□□□ 0.8
SCN1B-206ENST00000638536 SPTAN1Q13813 2472 aaKnown RBP20.05■□□□□ 0.8
SCN1B-206ENST00000638536 PTPN13Q12923 2485 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 KLF11O14901 512 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 CT45A8P0DMV1 189 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 CT45A9P0DMV2 189 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 DNASE1L1P49184 302 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 CDK9P50750 372 aaKnown RBP20.05■□□□□ 0.8
SCN1B-206ENST00000638536 NTRK2Q16620 822 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 CT45A2Q5DJT8 189 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 PRAMEF20Q5VT98 475 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 BICRALQ6AI39 1079 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 WDR53Q7Z5U6 358 aaPredicted RBP20.05■□□□□ 0.8
SCN1B-206ENST00000638536 TRIM42Q8IWZ5 723 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 TAGAPQ8N103 731 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 C17orf47Q8NEP4 570 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 OR2M7Q8NG81 312 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 PRR7Q8TB68 274 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 PAQR8Q8TEZ7 354 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 LCORQ96JN0 433 aaPredicted RBP20.05■□□□□ 0.8
SCN1B-206ENST00000638536 FOLH1BQ9HBA9 442 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 SLCO1B3Q9NPD5 702 aa20.05■□□□□ 0.8
SCN1B-206ENST00000638536 EIF3LQ9Y262 564 aaKnown RBP20.05■□□□□ 0.8
SCN1B-206ENST00000638536 GPR55Q9Y2T6 319 aaPredicted RBP20.05■□□□□ 0.8
SCN1B-206ENST00000638536 GOLGA8QA0A0J9YX86 632 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 GOLGA8OA6NCC3 632 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 NPIPA5E9PKD4 350 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 GOLGA8NF8WBI6 632 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 KLRC4-KLRK1H3BQV0 150 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 PLOD2O00469 737 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 EPHA3P29320 983 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 PPICP45877 212 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 PPP2R2AP63151 447 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 ALDH6A1Q02252 535 aaKnown RBP20.04■□□□□ 0.8
SCN1B-206ENST00000638536 OR2L13Q8N349 312 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 ZFP62Q8NB50 900 aaPredicted RBP20.04■□□□□ 0.8
SCN1B-206ENST00000638536 FAM98AQ8NCA5 519 aaKnown RBP20.04■□□□□ 0.8
SCN1B-206ENST00000638536 ERP27Q96DN0 273 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 MTERF3Q96E29 417 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 ASIC5Q9NY37 505 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 NOP53Q9NZM5 478 aaKnown RBP20.04■□□□□ 0.8
SCN1B-206ENST00000638536 PRODH2Q9UF12 536 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 NPIPA1Q9UND3 350 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 C19orf53Q9UNZ5 99 aaPredicted RBP20.04■□□□□ 0.8
SCN1B-206ENST00000638536 CFL2Q9Y281 166 aa20.04■□□□□ 0.8
SCN1B-206ENST00000638536 A0A087WV62 115 aa20.03■□□□□ 0.8
SCN1B-206ENST00000638536 ZNF195O14628 629 aa20.03■□□□□ 0.8
SCN1B-206ENST00000638536 HDAC3O15379 428 aa20.03■□□□□ 0.8
SCN1B-206ENST00000638536 HS6ST1O60243 411 aa20.03■□□□□ 0.8
SCN1B-206ENST00000638536 UNC5CO95185 931 aa20.03■□□□□ 0.8
SCN1B-206ENST00000638536 PSMG1O95456 288 aa20.03■□□□□ 0.8
SCN1B-206ENST00000638536 ALDOCP09972 364 aaKnown RBP20.03■□□□□ 0.8
SCN1B-206ENST00000638536 CNR1P21554 472 aa20.03■□□□□ 0.8
SCN1B-206ENST00000638536 DRD5P21918 477 aa20.03■□□□□ 0.8
SCN1B-206ENST00000638536 SLC22A10Q63ZE4 541 aa20.03■□□□□ 0.8
SCN1B-206ENST00000638536 OR4N2Q8NGD1 307 aa20.03■□□□□ 0.8
SCN1B-206ENST00000638536 SACM1LQ9NTJ5 587 aa20.03■□□□□ 0.8
SCN1B-206ENST00000638536 CNOT11Q9UKZ1 510 aaKnown RBP20.03■□□□□ 0.8
SCN1B-206ENST00000638536 MED12Q93074 2177 aa20.03■□□□□ 0.8
SCN1B-206ENST00000638536 SEMA7AO75326 666 aa20.02■□□□□ 0.8
SCN1B-206ENST00000638536 ERN1O75460 977 aaKnown RBP20.02■□□□□ 0.8
SCN1B-206ENST00000638536 BCAS2O75934 225 aaPredicted RBP20.02■□□□□ 0.8
SCN1B-206ENST00000638536 ABCB1P08183 1280 aaPredicted RBP20.02■□□□□ 0.8
SCN1B-206ENST00000638536 ZNF24P17028 368 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms