RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 AMDHD1Q96NU7 426 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 KCNK12Q9HB15 430 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 KIAA0355O15063 1070 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 CASC3O15234 703 aaKnown RBP18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 HCN1O60741 890 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 EPPINO95925 133 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 FGBP02675 491 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 CHRNB1P11230 501 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 DRD2P14416 443 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 MTNR1AP48039 350 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 ARPC4P59998 168 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 GALK2Q01415 458 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 GNA13Q14344 377 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 LCN1P1Q5VSP4 162 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 CD200R1LQ6Q8B3 271 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 KIF18BQ86Y91 864 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 SUN3Q8TAQ9 357 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 GATAD2BQ8WXI9 593 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 PLA2G12AQ9BZM1 189 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 NUFIP1Q9UHK0 495 aaKnown RBP18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 H7BY64 318 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 PLA2G10O15496 165 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 CHRM5P08912 532 aaPredicted RBP18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 LSM11P83369 360 aaKnown RBP eCLIP18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 QPRTQ15274 297 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 SLC39A5Q6ZMH5 540 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 UBE3DQ7Z6J8 389 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 CAMKK1Q8N5S9 505 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 TMIEQ8NEW7 156 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 OR52P1PQ8NH57 321 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 ENKURQ8TC29 256 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 PRAP1Q96NZ9 151 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 SLC38A2Q96QD8 506 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 FYTTD1Q96QD9 318 aaKnown RBP18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 PRRG3Q9BZD7 231 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 PRKAB1Q9Y478 270 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 PCYT1BQ9Y5K3 369 aaPredicted RBP18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 SLC9A3R1O14745 358 aaPredicted RBP18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 HLA-DQB1P01920 261 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 FHP07954 510 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 RHOP08100 348 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 HLA-DMAP28067 261 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 IFNGR2P38484 337 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 KIR2DL3P43628 341 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 FAM46CQ5VWP2 391 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 SYT14Q8NB59 555 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 SLC9A6Q92581 669 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 TOX2Q96NM4 488 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 TM9SF2Q99805 663 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 ARHGAP9Q9BRR9 750 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 SAP130Q9H0E3 1048 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 TOR4AQ9NXH8 423 aa18.95■□□□□ 0.62
SYNGAP1-227ENST00000638142 UBXN7O94888 489 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 CHRM4P08173 479 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 ADRB3P13945 408 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 MAN2A2P49641 1150 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 FABP5Q01469 135 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 DHCR24Q15392 516 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 Q5BKY6 102 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 OR4C11Q6IEV9 310 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 TMEM64Q6YI46 380 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 LIX1LQ8IVB5 337 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 PLA2G15Q8NCC3 412 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 ATP6V1C2Q8NEY4 427 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 ANKK1Q8NFD2 765 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 GNPDA2Q8TDQ7 276 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 ZFYVE19Q96K21 471 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 CAMK1GQ96NX5 476 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 DPH7Q9BTV6 452 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 PINK1Q9BXM7 581 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 EGLN3Q9H6Z9 239 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 SLC35C2Q9NQQ7 365 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 ACOXLQ9NUZ1 547 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 A0A0A6YYD5 115 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 TRDV1A0A1B0GX56 115 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 KDM4EB2RXH2 506 aaPredicted RBP18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 OR1F1O43749 312 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 APOL3O95236 402 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 LIMS3P0CW19 117 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 LIMS4P0CW20 117 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 PSMB5P28074 263 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 NTSP30990 170 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 BUD31P41223 144 aaPredicted RBP18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 NDUFAF5Q5TEU4 345 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 METAP1DQ6UB28 335 aaPredicted RBP18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 REM2Q8IYK8 340 aaPredicted RBP18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 OR8D1Q8WZ84 308 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 NR4A3Q92570 626 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 UCN3Q969E3 161 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 NRTNQ99748 197 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 COQ7Q99807 217 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 GON7Q9BXV9 100 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 SYNDIG1Q9H7V2 258 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 TBX21Q9UL17 535 aa18.94■□□□□ 0.62
SYNGAP1-227ENST00000638142 A0A0B4J293 547 aa18.93■□□□□ 0.62
SYNGAP1-227ENST00000638142 A0A0G2JPF8 293 aa18.93■□□□□ 0.62
SYNGAP1-227ENST00000638142 HNRNPCL2B2RXH8 293 aa18.93■□□□□ 0.62
SYNGAP1-227ENST00000638142 HNRNPCL3B7ZW38 293 aa18.93■□□□□ 0.62
SYNGAP1-227ENST00000638142 HNRNPCL4P0DMR1 293 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms