RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 EHD3Q9NZN3 535 aa15.38■□□□□ 0.05
CACNA1A-259ENST00000638114 PRODH2Q9UF12 536 aa15.38■□□□□ 0.05
CACNA1A-259ENST00000638114 ACAD8Q9UKU7 415 aa15.38■□□□□ 0.05
CACNA1A-259ENST00000638114 POLR3HQ9Y535 204 aaPredicted RBP15.38■□□□□ 0.05
CACNA1A-259ENST00000638114 NCKAP5O14513 1909 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 FIGNL2A6NMB9 653 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 HCN1O60741 890 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 TRIM3O75382 744 aaPredicted RBP15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 PPM1BO75688 479 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 RSL1D1O76021 490 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 SLU7O95391 586 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 SNRPB2P08579 225 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 COX6B1P14854 86 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 GDF1P27539 372 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 MASP1P48740 699 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 C2orf80Q0P641 193 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 PLCXD2Q0VAA5 305 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 ERCC6LQ2NKX8 1250 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 TRABD2AQ86V40 505 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 SRRM1Q8IYB3 904 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 FAM9CQ8IZT9 166 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 LIX1Q8N485 282 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 BANPQ8N9N5 519 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 AENQ8WTP8 325 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 SARAFQ96BY9 339 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 OMA1Q96E52 524 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 HSPBAP1Q96EW2 488 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 BBS4Q96RK4 519 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 GATA5Q9BWX5 397 aaPredicted RBP15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 SLC6A15Q9H2J7 730 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 RUBCNLQ9H714 662 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 METTL7AQ9H8H3 244 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 ANKRA2Q9H9E1 313 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 MIEF1Q9NQG6 463 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 QPCTLQ9NXS2 382 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 SENP1Q9P0U3 644 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 FIS1Q9Y3D6 152 aa15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 V9GYY5 206 aaPredicted RBP15.37■□□□□ 0.05
CACNA1A-259ENST00000638114 ACOX3O15254 700 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 TRIM13O60858 407 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 BCAS2O75934 225 aaPredicted RBP15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 SNX4O95219 450 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 ABCB1P08183 1280 aaPredicted RBP15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 NAGAP17050 411 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 DDCP20711 480 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 ENDOUP21128 410 aaKnown RBP15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 ACVR2AP27037 513 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 CASP3P42574 277 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 PPICP45877 212 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 TRPC1P48995 793 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 EMDP50402 254 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 DCAF7P61962 342 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 PMPCAQ10713 525 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 WLSQ5T9L3 541 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 EMBQ6PCB8 327 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 PACS2Q86VP3 889 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 TICAM1Q8IUC6 712 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 MCEMP1Q8IX19 187 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 FAM76AQ8TAV0 307 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 RND1Q92730 232 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 ERP27Q96DN0 273 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 FAM111AQ96PZ2 611 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 ANGPTL4Q9BY76 406 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 ACKR4Q9NPB9 350 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 MYNNQ9NPC7 610 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 SPRR3Q9UBC9 169 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 LGALS13Q9UHV8 139 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 PTGDR2Q9Y5Y4 395 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 PKDREJQ9NTG1 2253 aa15.36■□□□□ 0.05
CACNA1A-259ENST00000638114 PHF3Q92576 2039 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 C19orf84I3L1E1 186 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 AZIN1O14977 448 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 SPAG7O75391 227 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 SEC22BO75396 215 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 TRAPPC6AO75865 159 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 PRF1P14222 555 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 DRD5P21918 477 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 MPIP34949 423 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 NUP107P57740 925 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 DESI1Q6ICB0 168 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 FAM71E1Q6IPT2 247 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 NOXRED1Q6NXP6 359 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 WDR93Q6P2C0 686 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 ACAD11Q709F0 780 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 NUP54Q7Z3B4 507 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 NEIL3Q8TAT5 605 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 ASB5Q8WWX0 329 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 CAVIN3Q969G5 261 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 TRMOQ9BU70 441 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 ROPN1BQ9BZX4 212 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 ROPN1Q9HAT0 212 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 ALKBH4Q9NXW9 302 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 SLC17A7Q9P2U7 560 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 RNF6Q9Y252 685 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 ABCA12Q86UK0 2595 aa15.35■□□□□ 0.05
CACNA1A-259ENST00000638114 FRG2CA6NGY1 282 aa15.34■□□□□ 0.05
CACNA1A-259ENST00000638114 SLC28A1O00337 649 aa15.34■□□□□ 0.05
CACNA1A-259ENST00000638114 RGS14O43566 566 aa15.34■□□□□ 0.05
CACNA1A-259ENST00000638114 WDR1O75083 606 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms