RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 GPR18Q14330 331 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 DGUOKQ16854 277 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 FAM214AQ32MH5 1076 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 CPZQ66K79 652 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 GPR155Q7Z3F1 870 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 NUDT13Q86X67 352 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 RNF130Q86XS8 419 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 TRIM48Q8IWZ4 208 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 TPD52L3Q96J77 140 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 OR2B2Q9GZK3 357 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 SLC2A4RGQ9NR83 387 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 TMEM184CQ9NVA4 438 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 WSB2Q9NYS7 404 aaPredicted RBP10.87□□□□□ -0.67
CLN6-217ENST00000636964 TAS2R9Q9NYW1 312 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 GMEB2Q9UKD1 530 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 GSAPA4D1B5 854 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 HPGDP15428 266 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 DDCP20711 480 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 SSTP61278 116 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 YPEL5P62699 121 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 RPS26P62854 115 aaKnown RBP10.87□□□□□ -0.67
CLN6-217ENST00000636964 HSPB3Q12988 150 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 KCNAB2Q13303 367 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 LAPTM4AQ15012 233 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 PTCRAQ6ISU1 281 aaPredicted RBP10.87□□□□□ -0.67
CLN6-217ENST00000636964 SYT13Q7L8C5 426 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 TMEM179BQ7Z7N9 219 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 HLA-CQ95604 372 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 CCDC90BQ9GZT6 254 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 NT5DC2Q9H857 520 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 NECTIN3Q9NQS3 549 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.87□□□□□ -0.67
CLN6-217ENST00000636964 HS3ST3A1Q9Y663 406 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 OR6C74A6NCV1 312 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 POM121CA8CG34 1229 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 TNFRSF10CO14798 259 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 TNFP01375 233 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 OPN1SWP03999 348 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 GLAP06280 429 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 TGFBR2P37173 567 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 MVDP53602 400 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 MANFP55145 182 aaKnown RBP10.86□□□□□ -0.67
CLN6-217ENST00000636964 SNRPNP63162 240 aaKnown RBP10.86□□□□□ -0.67
CLN6-217ENST00000636964 HYAL2Q12891 473 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 SNTA1Q13424 505 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 CDK10Q15131 360 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 SYNPOQ8N3V7 929 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 CXorf36Q9H7Y0 433 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 PAQR5Q9NXK6 330 aaPredicted RBP10.86□□□□□ -0.67
CLN6-217ENST00000636964 OR6C2Q9NZP2 312 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 CNTRLQ7Z7A1 2325 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 MAN2B1O00754 1011 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 CLEC3AO75596 197 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 RPL3P39023 403 aaKnown RBP10.86□□□□□ -0.67
CLN6-217ENST00000636964 RABIFP47224 123 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 ETV1P50549 477 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 CSNK2BP67870 215 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 HEPACAMQ14CZ8 416 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 CYP27C1Q4G0S4 372 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 TOR1AIP1Q5JTV8 583 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 SPESP1Q6UW49 350 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 TAF8Q7Z7C8 310 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 ABI3BPQ7Z7G0 1075 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 KCT2Q8NC54 265 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 ST6GAL2Q96JF0 529 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 SLC6A18Q96N87 628 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 DACH2Q96NX9 599 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 GAL3ST1Q99999 423 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 FBXW2Q9UKT8 454 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 WDFY4Q6ZS81 3184 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 SH3D21A4FU49 640 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 FAM170BA6NMN3 283 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 TRIM77I1YAP6 450 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 VIPP01282 170 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 ALPPL2P10696 532 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 PCP4P48539 62 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 GPLD1P80108 840 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 DGCR6Q14129 220 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 SZRD1Q7Z422 152 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 ZDHHC21Q8IVQ6 265 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 OR8K3Q8NH51 312 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 MS4A6EQ96DS6 147 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 ARL5BQ96KC2 179 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 CHST8Q9H2A9 424 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 DNAJB9Q9UBS3 223 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 APOBEC3BQ9UH17 382 aaKnown RBP10.86□□□□□ -0.67
CLN6-217ENST00000636964 ABCG2Q9UNQ0 655 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 PCDHGB1Q9Y5G3 927 aa10.86□□□□□ -0.67
CLN6-217ENST00000636964 HNRNPCL2B2RXH8 293 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 G3V2T6 193 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 STK25O00506 426 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 MFN2O95140 757 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 NDUFS1P28331 727 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 PRIM2P49643 509 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 ABATP80404 500 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 SLAMF1Q13291 335 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 FZD2Q14332 565 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 ZNF750Q32MQ0 723 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 AGAP6Q5VW22 663 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 IKBIPQ70UQ0 350 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms