RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 TSSK6Q9BXA6 273 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 C11orf54Q9H0W9 315 aaPredicted RBP9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 AIG1Q9NVV5 245 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 TMEM45AQ9NWC5 275 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 KIDINS220Q9ULH0 1771 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 PCDHB14Q9Y5E9 798 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 IFNA4P05014 189 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 ADRB1P08588 477 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 ARSBP15848 533 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 PREPP48147 710 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 SPHARQ15513 63 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 ITPRIPL2Q3MIP1 535 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 KRBOX4Q5JUW0 171 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 KIAA0895LQ68EN5 471 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 NCBP2-AS2Q69YL0 99 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 ARL9Q6T311 187 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 CTU1Q7Z7A3 348 aaKnown RBP9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 ENTHD1Q8IYW4 607 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 TFAP2BQ92481 460 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 RPL3LQ92901 407 aaKnown RBP9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 GCDHQ92947 438 aaPredicted RBP9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 IL4I1Q96RQ9 567 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 MAP3K3Q99759 626 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 RGCCQ9H4X1 137 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 REEP4Q9H6H4 257 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 GSKIPQ9P0R6 139 aa9.41□□□□□ -0.9
SPTAN1-228ENST00000635853 SMIM30A4D0T7 59 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 LEUTXA8MZ59 168 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 NARSO43776 548 aaKnown RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 CREBL2O60519 120 aaPredicted RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 MTX2O75431 263 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 ACTL6BO94805 426 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 UBBP0CG47 229 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 UBCP0CG48 685 aaKnown RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 EPCAMP16422 314 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 DCTP40126 519 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 POLR2HP52434 150 aaKnown RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 SNU13P55769 128 aaKnown RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 RPS27AP62979 156 aaKnown RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 UBA52P62987 128 aaKnown RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 CREB5Q02930 508 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 GRB7Q14451 532 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 CHRFAM7AQ494W8 412 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 ZBTB37Q5TC79 503 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 METTL11BQ5VVY1 283 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 PYROXD2Q8N2H3 581 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 NANPQ8TBE9 248 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 THAP3Q8WTV1 239 aaPredicted RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 FAM163AQ96GL9 167 aaPredicted RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 SYT17Q9BSW7 474 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 PRTFDC1Q9NRG1 225 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 PCDHB10Q9UN67 800 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 CCDC88AQ3V6T2 1871 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 LOC102723532A0A0G2JNH3 316 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 PFKMP08237 780 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 F7P08709 466 aaPredicted RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 SNHG28P0DPA3 235 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 VAMP1P23763 118 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 METAP1DQ6UB28 335 aaPredicted RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 TMCO2Q7Z6W1 182 aaPredicted RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 ARHGAP12Q8IWW6 846 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 NLGN4XQ8N0W4 816 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 POC1BQ8TC44 478 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 TGM7Q96PF1 710 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 P2RY13Q9BPV8 354 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 FAM83CQ9BQN1 747 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 RBFOX1Q9NWB1 397 aaKnown RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 CTDSP2O14595 271 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 CKMT1AP12532 417 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 PPP3CBP16298 524 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 VSX2P58304 361 aaPredicted RBP9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 ELP2Q6IA86 826 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 Q6ZVU0 165 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 ARL11Q969Q4 196 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 GKN1Q9NS71 199 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 FBXW11Q9UKB1 542 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 FZD4Q9ULV1 537 aa9.4□□□□□ -0.9
SPTAN1-228ENST00000635853 UPK3BL1B0FP48 263 aa9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 UPK3BL2E5RIL1 263 aa9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 GSTM3P21266 225 aa9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 GPX3P22352 226 aa9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 PIK3CBP42338 1070 aa9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 SLC39A4Q6P5W5 647 aa9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 ADGRG3Q86Y34 549 aa9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 TMEM185AQ8NFB2 350 aa9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 OR56A1Q8NGH5 318 aa9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 TMEM234Q8WY98 164 aa9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 YIPF6Q96EC8 236 aa9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 FCRL3Q96P31 734 aaPredicted RBP9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 C7orf50Q9BRJ6 194 aaKnown RBP9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 EFCAB11Q9BUY7 163 aa9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 PAPOLGQ9BWT3 736 aaKnown RBP9.4□□□□□ -0.91
SPTAN1-228ENST00000635853 FAM170BA6NMN3 283 aa9.39□□□□□ -0.91
SPTAN1-228ENST00000635853 P04436 131 aa9.39□□□□□ -0.91
SPTAN1-228ENST00000635853 PFKLP17858 780 aa9.39□□□□□ -0.91
SPTAN1-228ENST00000635853 GABRB3P28472 473 aa9.39□□□□□ -0.91
SPTAN1-228ENST00000635853 DLX2Q07687 328 aaPredicted RBP9.39□□□□□ -0.91
SPTAN1-228ENST00000635853 AQP6Q13520 282 aa9.39□□□□□ -0.91
SPTAN1-228ENST00000635853 DPY19L1Q2PZI1 675 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms