RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 CNOT11Q9UKZ1 510 aaKnown RBP7.05□□□□□ -1.28
PTP4A1-206ENST00000627002 BAG5Q9UL15 447 aa7.05□□□□□ -1.28
PTP4A1-206ENST00000627002 DTNAQ9Y4J8 743 aa7.05□□□□□ -1.28
PTP4A1-206ENST00000627002 V9GYQ6 96 aa7.05□□□□□ -1.28
PTP4A1-206ENST00000627002 TDRD6O60522 2096 aaKnown RBP7.05□□□□□ -1.28
PTP4A1-206ENST00000627002 HEATR5BQ9P2D3 2071 aa7.05□□□□□ -1.28
PTP4A1-206ENST00000627002 COL5A1P20908 1838 aaPredicted RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 CFAP54Q96N23 3096 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 IGLV3-12A0A075B6K2 115 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 IGKV3D-11A0A0A0MRZ8 115 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 MYOCOSA0A1B0GUC4 107 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 B4E171 279 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 M0QX08 132 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 GNGT2O14610 69 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 POLR1CO15160 346 aaPredicted RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 TPST1O60507 370 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 PRAMEF2O60811 474 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 CPNE3O75131 537 aaKnown RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 GCM2O75603 506 aaPredicted RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 RFPL3O75679 317 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 ONECUT2O95948 504 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 CST1P01037 141 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 SEMG1P04279 462 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 IFNA16P05015 189 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 FABP3P05413 133 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 CYC1P08574 325 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 ALOX5P09917 674 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 CDK4P11802 303 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 ETS2P15036 469 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 ITGA2P17301 1181 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 MAOAP21397 527 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 PEX2P28328 305 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 AQP1P29972 269 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 RORAP35398 523 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 TSPAN7P41732 249 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 MAGEA2P43356 314 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 HSPA13P48723 471 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 BTG2P78543 158 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 HPCAP84074 193 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 RHAGQ02094 409 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 OCA2Q04671 838 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 MGAT2Q10469 447 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 COL9A2Q14055 689 aaPredicted RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 ZNHIT3Q15649 155 aaPredicted RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 SYPL1Q16563 259 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 MINDY4Q4G0A6 757 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 NKAIN1Q4KMZ8 207 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 GPAT3Q53EU6 434 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 IFI44LQ53G44 452 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 EXOSC6Q5RKV6 272 aaKnown RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 MFSD4BQ5TF39 518 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 LPCAT4Q643R3 524 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 HMBOX1Q6NT76 420 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 PWWP2BQ6NUJ5 590 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 FAM111BQ6SJ93 734 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 C16orf62Q7Z3J2 963 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 B3GNT8Q7Z7M8 397 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 AMIGO2Q86SJ2 522 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 SLC44A2Q8IWA5 706 aaPredicted RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 PACRGLQ8N7B6 248 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 BMPERQ8N8U9 685 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 ICA1LQ8NDH6 482 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 OR7G1Q8NGA0 311 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 OR52R1Q8NGF1 315 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 GEMIN6Q8WXD5 167 aaKnown RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 DNAJC9Q8WXX5 260 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 SLC9A6Q92581 669 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 PMM1Q92871 262 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 EME1Q96AY2 570 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 FKBP10Q96AY3 582 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 C16orf58Q96GQ5 468 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 TPD52L3Q96J77 140 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 ART5Q96L15 291 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 PTCHD1Q96NR3 888 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 STACQ99469 402 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 ZNF184Q99676 751 aaPredicted RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 CMKLR1Q99788 373 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 TACO1Q9BSH4 297 aaKnown RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 YIPF4Q9BSR8 244 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 C9orf16Q9BUW7 83 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 SEMA6AQ9H2E6 1030 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 PIGUQ9H490 435 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 TRIM45Q9H8W5 580 aaPredicted RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 CACYBPQ9HB71 228 aaKnown RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 ADAP2Q9NPF8 381 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 IL1RAPQ9NPH3 570 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 NECTIN3Q9NQS3 549 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 FBXO8Q9NRD0 319 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 POLE3Q9NRF9 147 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 DUSP22Q9NRW4 184 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 RXFP3Q9NSD7 469 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 OCIAD1Q9NX40 245 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 CDV3Q9UKY7 258 aaKnown RBP7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 SATB2Q9UPW6 733 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 PCDHGA8Q9Y5G5 932 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 PCDHGA1Q9Y5H4 931 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 FAM186AA6NE01 2351 aa7.04□□□□□ -1.28
PTP4A1-206ENST00000627002 CACNA1EQ15878 2313 aa7.03□□□□□ -1.28
PTP4A1-206ENST00000627002 C4orf47A7E2U8 309 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms