RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 MXRA7P84157 204 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 GABPB1Q06547 395 aaPredicted RBP7.91□□□□□ -1.14
SGMS1-211ENST00000626236 Q0VFX4 171 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 ZNF155Q12901 538 aaPredicted RBP7.91□□□□□ -1.14
SGMS1-211ENST00000626236 CHAF1BQ13112 559 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 ART3Q13508 389 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 CAPRIN1Q14444 709 aaKnown RBP7.91□□□□□ -1.14
SGMS1-211ENST00000626236 DEFB109BQ30KR1 87 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 TRMT5Q32P41 509 aaKnown RBP7.91□□□□□ -1.14
SGMS1-211ENST00000626236 DCAF10Q5QP82 559 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 LRIF1Q5T3J3 769 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 PLAG1Q6DJT9 500 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 BHLHB9Q6PI77 547 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 DLEU7Q6UYE1 221 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 HSDL2Q6YN16 418 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 SLC29A4Q7RTT9 530 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 C6orf120Q7Z4R8 191 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 MSRB3Q8IXL7 192 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 C9orf40Q8IXQ3 194 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 KBTBD2Q8IY47 623 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 ZNF615Q8N8J6 731 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 CLEC1AQ8NC01 280 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 APCDD1LQ8NCL9 501 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 OR56A1Q8NGH5 318 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 C16orf52Q8NHV5 167 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 PNPT1Q8TCS8 783 aaKnown RBP7.91□□□□□ -1.14
SGMS1-211ENST00000626236 ELP5Q8TE02 316 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 JADE3Q92613 823 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 AURKBQ96GD4 344 aaPredicted RBP7.91□□□□□ -1.14
SGMS1-211ENST00000626236 THOC3Q96J01 351 aaKnown RBP7.91□□□□□ -1.14
SGMS1-211ENST00000626236 SLC35G5Q96KT7 338 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 MS4A4EQ96PG1 132 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 GAL3ST4Q96RP7 486 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 SLC39A3Q9BRY0 314 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 YIPF4Q9BSR8 244 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 ITPAQ9BY32 194 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 DEFB126Q9BYW3 111 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 SEMA4CQ9C0C4 833 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 MMP25Q9NPA2 562 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 ATP13A2Q9NQ11 1180 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.91□□□□□ -1.14
SGMS1-211ENST00000626236 GID8Q9NWU2 228 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 SLC25A37Q9NYZ2 338 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 VAPAQ9P0L0 249 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 PRODH2Q9UF12 536 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 ZNF223Q9UK11 482 aaPredicted RBP7.91□□□□□ -1.14
SGMS1-211ENST00000626236 HEMK1Q9Y5R4 338 aaPredicted RBP7.91□□□□□ -1.14
SGMS1-211ENST00000626236 CFAP47Q6ZTR5 3102 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 CPAMD8Q8IZJ3 1885 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 A0A087WV48 116 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 TRBV5-3A0A0A0MS03 114 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 C2orf92A0A1B0GVN3 265 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 OR6C76A6NM76 312 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 A8MUI8 341 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 PRKNO60260 465 aaPredicted RBP7.9□□□□□ -1.14
SGMS1-211ENST00000626236 ZFAND5O76080 213 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 PSMG1O95456 288 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 KRT75O95678 551 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 HMGN2P05204 90 aaKnown RBP7.9□□□□□ -1.14
SGMS1-211ENST00000626236 SERPINA7P05543 415 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 ZCCHC18P0CG32 403 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 ITGAMP11215 1152 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 HOXB9P17482 250 aaPredicted RBP7.9□□□□□ -1.14
SGMS1-211ENST00000626236 CALB2P22676 271 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 ITGA3P26006 1051 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 PTPN6P29350 595 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 PRIM2P49643 509 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 MMP16P51512 607 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 MNAT1P51948 309 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 UCNP55089 124 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 RPS26P62854 115 aaKnown RBP7.9□□□□□ -1.14
SGMS1-211ENST00000626236 AP2B1P63010 937 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 CXADRP78310 365 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 RNF4P78317 190 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 AIMP2Q13155 320 aaKnown RBP7.9□□□□□ -1.14
SGMS1-211ENST00000626236 LASP1Q14847 261 aaKnown RBP7.9□□□□□ -1.14
SGMS1-211ENST00000626236 EBPQ15125 230 aaKnown RBP7.9□□□□□ -1.14
SGMS1-211ENST00000626236 NNATQ16517 81 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 HLA-DQA1Q5Y7H0 255 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 SAXO2Q658L1 398 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 MFSD12Q6NUT3 480 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 C6orf89Q6UWU4 347 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 WDR53Q7Z5U6 358 aaPredicted RBP7.9□□□□□ -1.14
SGMS1-211ENST00000626236 RNF130Q86XS8 419 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 TMEM102Q8N9M5 508 aaPredicted RBP7.9□□□□□ -1.14
SGMS1-211ENST00000626236 FBXO30Q8TB52 745 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 ZFP90Q8TF47 636 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 THAP3Q8WTV1 239 aaPredicted RBP7.9□□□□□ -1.14
SGMS1-211ENST00000626236 SLC9A6Q92581 669 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 ROPN1LQ96C74 230 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 LRRC58Q96CX6 371 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 NEURL3Q96EH8 262 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 GIMAP5Q96F15 307 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 OTUB1Q96FW1 271 aaPredicted RBP7.9□□□□□ -1.14
SGMS1-211ENST00000626236 C16orf58Q96GQ5 468 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 CGREF1Q99674 301 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 TRIM8Q9BZR9 551 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 WWTR1Q9GZV5 400 aa7.9□□□□□ -1.14
SGMS1-211ENST00000626236 ING2Q9H160 280 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms