RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 NEIL3Q8TAT5 605 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 EXOSC8Q96B26 276 aaKnown RBP9.94□□□□□ -0.82
SSBP4-215ENST00000625926 ERP27Q96DN0 273 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 C11orf24Q96F05 449 aaPredicted RBP9.94□□□□□ -0.82
SSBP4-215ENST00000625926 LCORQ96JN0 433 aaPredicted RBP9.94□□□□□ -0.82
SSBP4-215ENST00000625926 ZNF597Q96LX8 424 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 RILPQ96NA2 401 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 TTYH2Q9BSA4 534 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 ITPAQ9BY32 194 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 SHCBP1LQ9BZQ2 653 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 ENKD1Q9H0I2 346 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 KCNJ16Q9NPI9 418 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 OXSMQ9NWU1 459 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 SPRR3Q9UBC9 169 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 DTX4Q9Y2E6 619 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 PLLPQ9Y342 182 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 PCDHGB3Q9Y5G1 929 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 HIVEP3Q5T1R4 2406 aa9.94□□□□□ -0.82
SSBP4-215ENST00000625926 FAM47E-STBD1D6RA91 191 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 TRAPPC6AO75865 159 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 HPNP05981 417 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 GLI4P10075 376 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 PCSK2P16519 638 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 KRT4P19013 534 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 ENDOUP21128 410 aaKnown RBP9.93□□□□□ -0.82
SSBP4-215ENST00000625926 GDF1P27539 372 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 SSTR2P30874 369 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 MPIP34949 423 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 SOX18P35713 384 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 TRPC1P48995 793 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 EMDP50402 254 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 MRPS35P82673 323 aaKnown RBP9.93□□□□□ -0.82
SSBP4-215ENST00000625926 PLCXD2Q0VAA5 305 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 DUSP8Q13202 625 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 LTB4RQ15722 352 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 NNATQ16517 81 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 IMPG1Q17R60 797 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 ZNF628Q5EBL2 1059 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 C1orf185Q5T7R7 199 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 BICRALQ6AI39 1079 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 RTL6Q6ICC9 239 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 SLC30A6Q6NXT4 461 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 FRMD7Q6ZUT3 714 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 TRIM46Q7Z4K8 759 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 ZNF295-AS1Q8N0V1 137 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 SIMC1Q8NDZ2 872 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 ZNF675Q8TD23 568 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 EPS8L3Q8TE67 593 aaKnown RBP9.93□□□□□ -0.82
SSBP4-215ENST00000625926 OMA1Q96E52 524 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 TMEM41AQ96HV5 264 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 GNRHR2Q96P88 292 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 EBPLQ9BY08 206 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 TRIM8Q9BZR9 551 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 UCK2Q9BZX2 261 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 SLC6A15Q9H2J7 730 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 RRAGDQ9NQL2 400 aaPredicted RBP9.93□□□□□ -0.82
SSBP4-215ENST00000625926 SLC35C2Q9NQQ7 365 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 EHD3Q9NZN3 535 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 GPR55Q9Y2T6 319 aaPredicted RBP9.93□□□□□ -0.82
SSBP4-215ENST00000625926 WBP11Q9Y2W2 641 aaKnown RBP9.93□□□□□ -0.82
SSBP4-215ENST00000625926 FAM215AQ9Y5M1 114 aa9.93□□□□□ -0.82
SSBP4-215ENST00000625926 SCN2AQ99250 2005 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 C15orf38-AP3S2A0A0A6YYH1 394 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 TLDC2A0PJX2 215 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 NKX2-6A6NCS4 301 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 FRG2CA6NGY1 282 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 FAM90A27PA6NNH2 459 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 TO15178 435 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 RSL1D1O76021 490 aaKnown RBP9.92□□□□□ -0.82
SSBP4-215ENST00000625926 TOXO94900 526 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 UROSP10746 265 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 DDCP20711 480 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 ELAVL4P26378 380 aaKnown RBP9.92□□□□□ -0.82
SSBP4-215ENST00000625926 ZFP36L2P47974 494 aaKnown RBP9.92□□□□□ -0.82
SSBP4-215ENST00000625926 CDK9P50750 372 aaKnown RBP9.92□□□□□ -0.82
SSBP4-215ENST00000625926 SLC18A2Q05940 514 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 ZNF763Q0D2J5 394 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 C2orf80Q0P641 193 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 SNTA1Q13424 505 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 CEBPEQ15744 281 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 ERCC6LQ2NKX8 1250 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 FNDC7Q5VTL7 733 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 LIPMQ5VYY2 423 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 TIGD3Q6B0B8 471 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 TMEM81Q6P7N7 255 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 MEX3BQ6ZN04 569 aaKnown RBP9.92□□□□□ -0.82
SSBP4-215ENST00000625926 C4orf33Q8N1A6 199 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 ACBD4Q8NC06 268 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 OR1J4Q8NGS1 313 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 OR9A2Q8NGT5 310 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 FAM76AQ8TAV0 307 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 KAT2AQ92830 837 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 HGDQ93099 445 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 NTNG2Q96CW9 530 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 TMCO6Q96DC7 493 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 BBS4Q96RK4 519 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 UBQLN3Q9H347 655 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 C12orf65Q9H3J6 166 aaKnown RBP9.92□□□□□ -0.82
SSBP4-215ENST00000625926 METTL7AQ9H8H3 244 aa9.92□□□□□ -0.82
SSBP4-215ENST00000625926 ANKZF1Q9H8Y5 726 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms