RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 C11orf74Q86VG3 221 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 TM4SF19Q96DZ7 209 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 CHRDQ9H2X0 955 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 CACYBPQ9HB71 228 aaKnown RBP9.33□□□□□ -0.92
VTA1-205ENST00000620996 RLIMQ9NVW2 624 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 TMCC3Q9ULS5 477 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 FUOMA2VDF0 154 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 TRMUO75648 421 aaKnown RBP9.33□□□□□ -0.92
VTA1-205ENST00000620996 CHRM4P08173 479 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 NR1D2Q14995 579 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 MLC1Q15049 377 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 USP51Q70EK9 711 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 GPR141Q7Z602 305 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 BPHLQ86WA6 291 aaPredicted RBP9.33□□□□□ -0.92
VTA1-205ENST00000620996 OR7G2Q8NG99 324 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 SGCDQ92629 289 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 THAP11Q96EK4 314 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 EPYCQ99645 322 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 SYNDIG1Q9H7V2 258 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 NDOR1Q9UHB4 597 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 ENPP4Q9Y6X5 453 aa9.33□□□□□ -0.92
VTA1-205ENST00000620996 SMIM31A0A1B0GVY4 71 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 PRAMEF27A3QJZ7 478 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 BCAT2O15382 392 aaPredicted RBP9.32□□□□□ -0.92
VTA1-205ENST00000620996 FRS3O43559 492 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 FGF17O60258 216 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 UGT2B11O75310 529 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 CCNB2O95067 398 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 MFN2O95140 757 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 SLC5A2P31639 672 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 MAT1AQ00266 395 aaKnown RBP9.32□□□□□ -0.92
VTA1-205ENST00000620996 KCNC4Q03721 635 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 SLC13A2Q13183 592 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 ERV3-1Q14264 604 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 SF3B4Q15427 424 aaKnown RBP eCLIP9.32□□□□□ -0.92
VTA1-205ENST00000620996 CTU2Q2VPK5 515 aaKnown RBP9.32□□□□□ -0.92
VTA1-205ENST00000620996 KCTD8Q6ZWB6 473 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 TSEN54Q7Z6J9 526 aaKnown RBP9.32□□□□□ -0.92
VTA1-205ENST00000620996 TMEM52Q8NDY8 209 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 CADM4Q8NFZ8 388 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 KLHL6Q8WZ60 621 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 ALPK1Q96QP1 1244 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 APOL4Q9BPW4 351 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 MS4A12Q9NXJ0 267 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 XPNPEP2O43895 674 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 OR10H3O60404 316 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 CAPZBP47756 277 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 NXPH1P58417 271 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 TRMT12Q53H54 448 aaKnown RBP9.32□□□□□ -0.92
VTA1-205ENST00000620996 MLIPQ5VWP3 458 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 KDM4DQ6B0I6 523 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 USP53Q70EK8 1073 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 RNF44Q7L0R7 432 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 CLVS1Q8IUQ0 354 aaPredicted RBP9.32□□□□□ -0.92
VTA1-205ENST00000620996 DTX3Q8N9I9 347 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 AQP11Q8NBQ7 271 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 SETD9Q8NE22 299 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 GPR32P1Q8NGA4 272 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 FAM174AQ8TBP5 190 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 SFXN5Q8TD22 340 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 CDS1Q92903 461 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 PEX11GQ96HA9 241 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.32□□□□□ -0.92
VTA1-205ENST00000620996 GPR27Q9NS67 375 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 KCMF1Q9P0J7 381 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 MKLN1Q9UL63 735 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 SLC22A7Q9Y694 548 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 OR2W5A6NFC9 320 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 ANGPTL1O95841 491 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 CPMP14384 443 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 AVPR1BP47901 424 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 CLK3P49761 638 aaKnown RBP9.32□□□□□ -0.92
VTA1-205ENST00000620996 CHRNEQ04844 493 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 BNIP3Q12983 259 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 PIN1Q13526 163 aaPredicted RBP9.32□□□□□ -0.92
VTA1-205ENST00000620996 GNA13Q14344 377 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 PUM1Q14671 1186 aaKnown RBP eCLIP9.32□□□□□ -0.92
VTA1-205ENST00000620996 KCNAB1Q14722 419 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 EXOSC7Q15024 291 aaKnown RBP9.32□□□□□ -0.92
VTA1-205ENST00000620996 CARTPTQ16568 116 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 ZC3H12BQ5HYM0 836 aaKnown RBP9.32□□□□□ -0.92
VTA1-205ENST00000620996 ZNF311Q5JNZ3 666 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 WDR45BQ5MNZ6 344 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 C6orf141Q5SZD1 244 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 CCNJQ5T5M9 372 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 SLC36A4Q6YBV0 504 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 TMEM64Q6YI46 380 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 LACC1Q8IV20 430 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 SLC16A11Q8NCK7 471 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 CHDHQ8NE62 594 aaPredicted RBP9.32□□□□□ -0.92
VTA1-205ENST00000620996 ANKK1Q8NFD2 765 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 UBE2FQ969M7 185 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 MOAP1Q96BY2 351 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 ZNF764Q96H86 408 aaPredicted RBP9.32□□□□□ -0.92
VTA1-205ENST00000620996 ZNF681Q96N22 645 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 NIPSNAP1Q9BPW8 284 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 GABARAPL1Q9H0R8 117 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 LRIT1Q9P2V4 623 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 SNX5Q9Y5X3 404 aa9.32□□□□□ -0.92
VTA1-205ENST00000620996 MYO15AQ9UKN7 3530 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms