RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 AUTS2Q8WXX7 1259 aa12.32□□□□□ -0.44
SKP2-209ENST00000620197 AP2M1Q96CW1 435 aa12.32□□□□□ -0.44
SKP2-209ENST00000620197 RNFT2Q96EX2 444 aa12.32□□□□□ -0.44
SKP2-209ENST00000620197 ARHGDIGQ99819 225 aa12.32□□□□□ -0.44
SKP2-209ENST00000620197 PITHD1Q9GZP4 211 aaPredicted RBP12.32□□□□□ -0.44
SKP2-209ENST00000620197 IRF2BPLQ9H1B7 796 aa12.32□□□□□ -0.44
SKP2-209ENST00000620197 DDX31Q9H8H2 851 aaKnown RBP12.32□□□□□ -0.44
SKP2-209ENST00000620197 MIEF1Q9NQG6 463 aa12.32□□□□□ -0.44
SKP2-209ENST00000620197 GPR34Q9UPC5 381 aa12.32□□□□□ -0.44
SKP2-209ENST00000620197 POLHQ9Y253 713 aa12.32□□□□□ -0.44
SKP2-209ENST00000620197 A0A1W2PPV9 198 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 K7ESM1 405 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 TGM5O43548 720 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 BNIP3LO60238 219 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 ICMTO60725 284 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 UBXN7O94888 489 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 CHRM4P08173 479 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 GSTM3P21266 225 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 OMPP47874 163 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 EPHA5P54756 1037 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 CD83Q01151 205 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 PRAMEF14Q5SWL7 426 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 PRAMEF13Q5VWM6 474 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 BHLHB9Q6PI77 547 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 PAMR1Q6UXH9 720 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 DEF8Q6ZN54 512 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 BMPERQ8N8U9 685 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 UCN3Q969E3 161 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 MARVELD3Q96A59 401 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 ZFYVE19Q96K21 471 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 P2RX2Q9UBL9 471 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 ASB4Q9Y574 426 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 LINC00854A0A1B0GVQ3 168 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 PI15O43692 258 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 TSPAN19P0C672 248 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 TFPIP10646 304 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 BTCP35070 178 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 SOX18P35713 384 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 HTR2BP41595 481 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 TRA2BP62995 288 aaKnown RBP12.31□□□□□ -0.44
SKP2-209ENST00000620197 SF3A2Q15428 464 aaKnown RBP12.31□□□□□ -0.44
SKP2-209ENST00000620197 PDZK1Q5T2W1 519 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 TMEM64Q6YI46 380 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 TMEM91Q6ZNR0 172 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 GATAD2BQ8WXI9 593 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 UFD1Q92890 307 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 TRIM63Q969Q1 353 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 RPRD1BQ9NQG5 326 aaKnown RBP12.31□□□□□ -0.44
SKP2-209ENST00000620197 ASB6Q9NWX5 421 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 HEATR5BQ9P2D3 2071 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 CBLCQ9ULV8 474 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 SLC30A4O14863 429 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 CASC3O15234 703 aaKnown RBP12.31□□□□□ -0.44
SKP2-209ENST00000620197 HPGDSO60760 199 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 TMCC2O75069 709 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 SLC6A1P30531 599 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 SLC1A3P43003 542 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 MTNR1AP48039 350 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 TMEM107Q6UX40 140 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 CFAP206Q8IYR0 622 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 Q8N402 240 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 BBS10Q8TAM1 723 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 IRF7Q92985 503 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 TMEM203Q969S6 136 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 CHFRQ96EP1 664 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 AMDHD1Q96NU7 426 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 EGLN3Q9H6Z9 239 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 FAM8A1Q9UBU6 413 aa12.31□□□□□ -0.44
SKP2-209ENST00000620197 MDC1Q14676 2089 aaKnown RBP12.3□□□□□ -0.44
SKP2-209ENST00000620197 A0A1W2PRU2 124 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 C5orf58C9J3I9 102 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 SURF4O15260 269 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 TNNI3P19429 210 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 THBS2P35442 1172 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 CCL23P55773 120 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 RRAS2P62070 204 aaPredicted RBP12.3□□□□□ -0.44
SKP2-209ENST00000620197 BDH1Q02338 343 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 ARHGAP19Q14CB8 494 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 QPRTQ15274 297 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 PLA1AQ53H76 456 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 PYDC2Q56P42 97 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 RASSF6Q6ZTQ3 369 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 TRIM48Q8IWZ4 208 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 OR52N1Q8NH53 320 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 DIO2Q92813 273 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 CREB3L1Q96BA8 519 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 SCLYQ96I15 445 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 SAP130Q9H0E3 1048 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 ANKRD19PQ9H560 264 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 A0A087WUU8 490 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 NEDD8-MDP1E9PL57 170 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 KIAA0355O15063 1070 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 LYRM1O43325 122 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 CSF2P04141 144 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 LINC00271P0C7V0 271 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 SLC2A2P11168 524 aaPredicted RBP12.3□□□□□ -0.44
SKP2-209ENST00000620197 MAPK12P53778 367 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 MANFP55145 182 aaKnown RBP12.3□□□□□ -0.44
SKP2-209ENST00000620197 TSPAN31Q12999 210 aa12.3□□□□□ -0.44
SKP2-209ENST00000620197 IQCHQ86VS3 1027 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms