RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 MED12LQ86YW9 2145 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 MEGF8Q7Z7M0 2845 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 A0A087WZY1 265 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 CLGNO14967 610 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 FGF17O60258 216 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 GCM2O75603 506 aaPredicted RBP4.1□□□□□ -1.75
SNCA-213ENST00000618500 GPR75O95800 540 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 SOD3P08294 240 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 CERS1P27544 350 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 GRIA1P42261 906 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 PIK3CBP42338 1070 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 KHKP50053 298 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 DVL1P1P54792 670 aaPredicted RBP4.1□□□□□ -1.75
SNCA-213ENST00000618500 RPS3AP61247 264 aaKnown RBP4.1□□□□□ -1.75
SNCA-213ENST00000618500 RPS13P62277 151 aaKnown RBP4.1□□□□□ -1.75
SNCA-213ENST00000618500 ZNF844Q08AG5 666 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 CCNG2Q16589 344 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 FAM174BQ3ZCQ3 159 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 OR52E8Q6IFG1 317 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 FAM45BPQ6NSW5 357 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 P4HA3Q7Z4N8 544 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 KIAA1328Q86T90 577 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 VSTM4Q8IW00 320 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 TXLNBQ8N3L3 684 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 FAM45AQ8TCE6 357 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 EEF1AKMT1Q8WVE0 214 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 MAIP1Q8WWC4 291 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 DHRS9Q9BPW9 319 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 ZBTB26Q9HCK0 441 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 B3GALT5Q9Y2C3 310 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 HYOU1Q9Y4L1 999 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 WIF1Q9Y5W5 379 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 A0A0A6YYD5 115 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 IQANK1A0A1B0GTG1 560 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 SHISA9B4DS77 424 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 SMAD9O15198 467 aaKnown RBP4.1□□□□□ -1.75
SNCA-213ENST00000618500 TRAPPC6AO75865 159 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 WISP3O95389 354 aaPredicted RBP4.1□□□□□ -1.75
SNCA-213ENST00000618500 B3GALT4O96024 378 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 TACSTD2P09758 323 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 TNNI3P19429 210 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 MGAT1P26572 445 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 ABCD3P28288 659 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 MAGEA1P43355 309 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 IL2P60568 153 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 HMGCS1Q01581 520 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 MAP4K2Q12851 820 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 TSTA3Q13630 321 aaPredicted RBP4.1□□□□□ -1.75
SNCA-213ENST00000618500 P2RY6Q15077 328 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 ZSWIM7Q19AV6 140 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 C3orf36Q3SXR2 165 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 TCHHL1Q5QJ38 904 aaPredicted RBP4.1□□□□□ -1.75
SNCA-213ENST00000618500 ZNF470Q6ECI4 717 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 METTL2BQ6P1Q9 378 aaKnown RBP4.1□□□□□ -1.75
SNCA-213ENST00000618500 LRRC70Q7Z2Q7 622 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 TRIM42Q8IWZ5 723 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 ZNF610Q8N9Z0 462 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 ZNF511Q8NB15 262 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 SYT14Q8NB59 555 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 TMCO6Q96DC7 493 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 MFSD3Q96ES6 412 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 LINGO1Q96FE5 620 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 ADGRG7Q96K78 797 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 BTBD9Q96Q07 612 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 JMJD8Q96S16 334 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 ARL15Q9NXU5 204 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 ADAM29Q9UKF5 820 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 DTX4Q9Y2E6 619 aa4.1□□□□□ -1.75
SNCA-213ENST00000618500 A0A1W2PP18 115 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 CTAGE9A4FU28 777 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 ZIC3O60481 467 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 TSPAN2O60636 221 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 ICOSLGO75144 302 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 SLITRK5O94991 958 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 SEMA3DO95025 777 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 TTC4O95801 387 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 ITGA2P17301 1181 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 S1PR1P21453 382 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 NT5EP21589 574 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 LCN1P31025 176 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 TLX1P31314 330 aaPredicted RBP4.09□□□□□ -1.75
SNCA-213ENST00000618500 MASP1P48740 699 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 EFNA4P52798 201 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 FBXW4P57775 412 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 IRX1P78414 480 aaPredicted RBP4.09□□□□□ -1.75
SNCA-213ENST00000618500 THOC5Q13769 683 aaKnown RBP4.09□□□□□ -1.75
SNCA-213ENST00000618500 SLBPQ14493 270 aaKnown RBP eCLIP4.09□□□□□ -1.75
SNCA-213ENST00000618500 SHISA2Q6UWI4 295 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 CLNKQ7Z7G1 428 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 TMPRSS11BQ86T26 416 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 ADAMTSL2Q86TH1 951 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 ACOT4Q8N9L9 421 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 ZNF675Q8TD23 568 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 RIT1Q92963 219 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 GFM2Q969S9 779 aaKnown RBP4.09□□□□□ -1.75
SNCA-213ENST00000618500 CMTM7Q96FZ5 175 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 RUNDC3BQ96NL0 473 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 FAM111AQ96PZ2 611 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 CHP1Q99653 195 aa4.09□□□□□ -1.75
SNCA-213ENST00000618500 MAPKAP1Q9BPZ7 522 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms