RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 MCHR1Q99705 422 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 SLC22A4Q9H015 551 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 CHRAC1Q9NRG0 131 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 TERTO14746 1132 aaKnown RBP12.07□□□□□ -0.48
TCF4-248ENST00000616053 FCER1GP30273 86 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 EDDM3BP56851 147 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 CST9LP1Q5W188 147 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 EEF1DP3Q658K8 133 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 PAPD4Q6PIY7 484 aaKnown RBP12.07□□□□□ -0.48
TCF4-248ENST00000616053 KCND3Q9UK17 655 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 SLC7A7Q9UM01 511 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 NOBOXO60393 691 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 SERPINA5P05154 406 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 NDUFB7P17568 137 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 ZNF674Q2M3X9 581 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 C11orf91Q3C1V1 193 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 LIN52Q52LA3 116 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 IL34Q6ZMJ4 242 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 PLD5Q8N7P1 536 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 NR4A3Q92570 626 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 CLSTN3Q9BQT9 956 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 ERVK-19Q9WJR5 959 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 RCCD1A6NED2 376 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 ENGP17813 658 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 PKLRP30613 574 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 SOX3P41225 446 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 RPL23AP62750 156 aaKnown RBP12.07□□□□□ -0.48
TCF4-248ENST00000616053 BST1Q10588 318 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 TMPRSS12Q86WS5 348 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 FGGYQ96C11 551 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 KCTD15Q96SI1 283 aaPredicted RBP12.07□□□□□ -0.48
TCF4-248ENST00000616053 RNF39Q9H2S5 420 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 INSL5Q9Y5Q6 135 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 TMEM63AO94886 807 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 ADRB3P13945 408 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 NAA10P41227 235 aaPredicted RBP12.07□□□□□ -0.48
TCF4-248ENST00000616053 RPS15AP62244 130 aaKnown RBP12.07□□□□□ -0.48
TCF4-248ENST00000616053 SH3RF1Q7Z6J0 888 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 GNPDA2Q8TDQ7 276 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 PSMF1Q92530 271 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 SCPEP1Q9HB40 452 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 TAS2R3Q9NYW6 316 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 ZNF732B4DXR9 585 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 RP2O75695 350 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 RPS13P62277 151 aaKnown RBP12.07□□□□□ -0.48
TCF4-248ENST00000616053 FRG2Q64ET8 278 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 TAC4Q86UU9 113 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 WDR31Q8NA23 367 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 FAM71F1Q96KD3 344 aaPredicted RBP12.07□□□□□ -0.48
TCF4-248ENST00000616053 FRG2BQ96QU4 278 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 BEX2Q9BXY8 128 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 BEX1Q9HBH7 125 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 CDH22Q9UJ99 828 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 VDAC3Q9Y277 283 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 G0S2P27469 103 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 FABP6P51161 128 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 FBXL20Q96IG2 436 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 RIOX1Q9H6W3 641 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 POMPQ9Y244 141 aa12.07□□□□□ -0.48
TCF4-248ENST00000616053 DIDO1Q9BTC0 2240 aaKnown RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 CTDNEP1O95476 244 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 TNFRSF4P43489 277 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 GSK3BP49841 420 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 AGFG1P52594 562 aaKnown RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 MLLT10P55197 1068 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 HSD17B12Q53GQ0 312 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 KRBOX4Q5JUW0 171 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 KDM4DQ6B0I6 523 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 LRRN1Q6UXK5 716 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 AQP11Q8NBQ7 271 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 OR4A16Q8NH70 328 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 FOXRED1Q96CU9 486 aaPredicted RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 TRMT2BQ96GJ1 504 aaKnown RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 TFB2MQ9H5Q4 396 aaKnown RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 MEPEQ9NQ76 525 aaPredicted RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 SLC6A14Q9UN76 642 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 KLHL33A6NCF5 533 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 IMPA2O14732 288 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 PRDX3P30048 256 aaKnown RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 ALDH3B2P48448 385 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 CSNK1A1P48729 337 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 TRAM2Q15035 370 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 FAM69AQ5T7M9 428 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 LPCAT3Q6P1A2 487 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 TICAM1Q8IUC6 712 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 KCNE4Q8WWG9 221 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 CACNG4Q9UBN1 327 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 BIVM-ERCC5R4GMW8 1640 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 CLASP1Q7Z460 1538 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 KIF1BO60333 1816 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 ID4P47928 161 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 MSMO1Q15800 293 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 NANOGP8Q6NSW7 305 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 GSG1LQ6UXU4 331 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 C15orf52Q6ZUT6 534 aaKnown RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 PRELID2Q8N945 189 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 UBAC2Q8NBM4 344 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 CCDC32Q9BV29 185 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 OR51B5Q9H339 312 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 IL23AQ9NPF7 189 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms