RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 CLCA3PQ9Y6N3 262 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 CNTRLQ7Z7A1 2325 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 J3QLW9 94 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 RCBTB2O95199 551 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 CTSLP07711 333 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 ZNF19P17023 458 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 PSMA3P25788 255 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 EIF2DP41214 584 aaKnown RBP8.21□□□□□ -1.09
LIG4-204ENST00000611712 RPS21P63220 83 aaKnown RBP8.21□□□□□ -1.09
LIG4-204ENST00000611712 ABATP80404 500 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 SIM1P81133 766 aaPredicted RBP8.21□□□□□ -1.09
LIG4-204ENST00000611712 PRKCDQ05655 676 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 ZNF791Q3KP31 576 aaPredicted RBP8.21□□□□□ -1.09
LIG4-204ENST00000611712 BCL7AQ4VC05 210 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 ANKRD33Q7Z3H0 272 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 WDR53Q7Z5U6 358 aaPredicted RBP8.21□□□□□ -1.09
LIG4-204ENST00000611712 RBM45Q8IUH3 476 aaKnown RBP8.21□□□□□ -1.09
LIG4-204ENST00000611712 LYSMD2Q8IV50 215 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 NRMQ8IXM6 262 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 NR4A3Q92570 626 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 CITED4Q96RK1 184 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 MS4A8Q9BY19 250 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 PAK6Q9NQU5 681 aaPredicted RBP8.21□□□□□ -1.09
LIG4-204ENST00000611712 TM7SF3Q9NS93 570 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 SOHLH2Q9NX45 425 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 CLEC3AO75596 197 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 POLR2CP19387 275 aaPredicted RBP8.21□□□□□ -1.1
LIG4-204ENST00000611712 CAMK1Q14012 370 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 CDKN3Q16667 212 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 KLBQ86Z14 1044 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 Q8N402 240 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 CAMKVQ8NCB2 501 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 PROKR2Q8NFJ6 384 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 VN1R2Q8NFZ6 395 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 OR5K2Q8NHB8 316 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 BADQ92934 168 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 ZDHHC5Q9C0B5 715 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 QRSL1Q9H0R6 528 aaKnown RBP8.21□□□□□ -1.1
LIG4-204ENST00000611712 MED28Q9H204 178 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 CLEC4MQ9H2X3 399 aaPredicted RBP8.21□□□□□ -1.1
LIG4-204ENST00000611712 MVB12BQ9H7P6 319 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 PLCXD1Q9NUJ7 323 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 CLEC2DQ9UHP7 191 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 STON1Q9Y6Q2 735 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 NINQ8N4C6 2090 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 OTOFQ9HC10 1997 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 ANTXRLA6NF34 631 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 CD8B2A6NJW9 211 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 AGAP14A8MT82 685 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 GTPBP1O00178 669 aaKnown RBP8.21□□□□□ -1.1
LIG4-204ENST00000611712 ADH1BP00325 375 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 YES1P07947 543 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 CD8BP10966 210 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 GNSP15586 552 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 PCMT1P22061 227 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 ACADLP28330 430 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 HOXA9P31269 272 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 BMP8BP34820 402 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 PRDX1Q06830 199 aaKnown RBP8.21□□□□□ -1.1
LIG4-204ENST00000611712 ILKQ13418 452 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 RUNX3Q13761 415 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 KCNJ8Q15842 424 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 OR2G6Q5TZ20 316 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 SPATC1Q76KD6 591 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 ZNF765Q7L2R6 523 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 BMP8AQ7Z5Y6 402 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 TAF8Q7Z7C8 310 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 TMC8Q8IU68 726 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 LAS2Q8IYD9 372 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 IZUMO1Q8IYV9 350 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 OR9A2Q8NGT5 310 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 OR51A7Q8NH64 312 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 NXPE3Q969Y0 559 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 SPNS1Q9H2V7 528 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 TRIM36Q9NQ86 728 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 ACSS1Q9NUB1 689 aaPredicted RBP8.21□□□□□ -1.1
LIG4-204ENST00000611712 TMEM184CQ9NVA4 438 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 LYARQ9NX58 379 aaKnown RBP8.21□□□□□ -1.1
LIG4-204ENST00000611712 TMPRSS11EQ9UL52 423 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 MED31Q9Y3C7 131 aa8.21□□□□□ -1.1
LIG4-204ENST00000611712 HTR3EA5X5Y0 456 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 PRKRAO75569 313 aaKnown RBP8.2□□□□□ -1.1
LIG4-204ENST00000611712 HLA-DQA2P01906 255 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 C1QCP02747 245 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 HIST1H2ABP04908 130 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 IGFBP1P08833 259 aaPredicted RBP8.2□□□□□ -1.1
LIG4-204ENST00000611712 MRPL3P09001 348 aaKnown RBP8.2□□□□□ -1.1
LIG4-204ENST00000611712 ELAVL4P26378 380 aaKnown RBP8.2□□□□□ -1.1
LIG4-204ENST00000611712 SSTR4P31391 388 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 IRS1P35568 1242 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 P2RY2P41231 377 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 RHAGQ02094 409 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 BIKQ13323 160 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 PRSS36Q5K4E3 855 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 HLA-DQA1Q5Y7H0 255 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 SYCE2Q6PIF2 218 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 ABHD13Q7L211 337 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 HIST3H2AQ7L7L0 130 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 FAM220AQ7Z4H9 259 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms