RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 DDX31Q9H8H2 851 aaKnown RBP5.73□□□□□ -1.49
CUX1-220ENST00000607092 CXorf21Q9HAI6 301 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 PROK2Q9HC23 129 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 KLRF1Q9NZS2 232 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 ADAM29Q9UKF5 820 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 IKZF3Q9UKT9 509 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 NFU1Q9UMS0 254 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 EXO1Q9UQ84 846 aaKnown RBP5.73□□□□□ -1.49
CUX1-220ENST00000607092 SLC6A5Q9Y345 797 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 TESMINQ9Y4I5 508 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 NINQ8N4C6 2090 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 MYOCOSA0A1B0GUC4 107 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 C1orf226A1L170 272 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 PRAMEF25A6NGN4 478 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 OR6C70A6NIJ9 312 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 C16orf97H3BN30 126 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 PLPP1O14494 284 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 GNB5O14775 395 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 KERAO60938 352 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 TP53P04637 393 aaPredicted RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 FESP07332 822 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 ABCB1P08183 1280 aaPredicted RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 CD8BP10966 210 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 PEPDP12955 493 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 CPMP14384 443 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 POU2F1P14859 743 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 PAX1P15863 534 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 CD22P20273 847 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 NT5EP21589 574 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 PCSK6P29122 969 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 CPOXP36551 454 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 PPICP45877 212 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 KCNJ5P48544 419 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 XKP51811 444 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 NAGLUP54802 743 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 FBXW4P57775 412 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 RPS3AP61247 264 aaKnown RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 ETF1P62495 437 aaKnown RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 DR1Q01658 176 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 PLCXD2Q0VAA5 305 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 PDIA2Q13087 525 aaKnown RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 CALCOCO2Q13137 446 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 NAB1Q13506 487 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 DDX39BQ13838 428 aaKnown RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 ZNF460Q14592 562 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 POU4F3Q15319 338 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 FAM83EQ2M2I3 478 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 EIPR1Q53HC9 387 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 BEX5Q5H9J7 111 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 WIPI1Q5MNZ9 446 aaPredicted RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 GRTP1Q5TC63 336 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 MRM1Q6IN84 353 aaKnown RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 KLC3Q6P597 504 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 PODNL1Q6PEZ8 512 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 RAPH1Q70E73 1250 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 PLCZ1Q86YW0 608 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 IGDCC3Q8IVU1 814 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 VWA5B2Q8N398 1253 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 C9orf106Q8NAJ2 232 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 FBXO36Q8NEA4 188 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 TRPC4APQ8TEL6 797 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 PYROXD1Q8WU10 500 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 SREK1Q8WXA9 508 aaKnown RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 GFM2Q969S9 779 aaKnown RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 GTPBP3Q969Y2 492 aaKnown RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 INTS12Q96CB8 462 aaKnown RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 TRMT61AQ96FX7 289 aaKnown RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 MS4A14Q96JA4 679 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 LCORQ96JN0 433 aaPredicted RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 SFXN2Q96NB2 322 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 FAM111AQ96PZ2 611 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 GPR22Q99680 433 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 RBBP8Q99708 897 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 SMR3AQ99954 134 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 TUBA1CQ9BQE3 449 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 FAIM2Q9BWQ8 316 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 DDX47Q9H0S4 455 aaKnown RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 OR51B5Q9H339 312 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 SDHAF3Q9NRP4 125 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 PAQR5Q9NXK6 330 aaPredicted RBP5.72□□□□□ -1.49
CUX1-220ENST00000607092 TAS2R10Q9NYW0 307 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 SLC17A6Q9P2U8 582 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 TMCO1Q9UM00 188 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 MAPRE3Q9UPY8 281 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 PPP2R2CQ9Y2T4 447 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 ASB4Q9Y574 426 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 SNX8Q9Y5X2 465 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 PSAT1Q9Y617 370 aa5.72□□□□□ -1.49
CUX1-220ENST00000607092 DOCK7Q96N67 2140 aa5.71□□□□□ -1.5
CUX1-220ENST00000607092 A0A0A6YYD5 115 aa5.71□□□□□ -1.5
CUX1-220ENST00000607092 A0A1W2PNV4 684 aa5.71□□□□□ -1.5
CUX1-220ENST00000607092 SLC22A20A6NK97 555 aa5.71□□□□□ -1.5
CUX1-220ENST00000607092 SUPT3HB4E1H0 165 aa5.71□□□□□ -1.5
CUX1-220ENST00000607092 E7ESA3 106 aa5.71□□□□□ -1.5
CUX1-220ENST00000607092 CCDC188H7C350 402 aa5.71□□□□□ -1.5
CUX1-220ENST00000607092 HRKO00198 91 aa5.71□□□□□ -1.5
CUX1-220ENST00000607092 SAP18O00422 153 aaKnown RBP5.71□□□□□ -1.5
CUX1-220ENST00000607092 PLOD2O00469 737 aa5.71□□□□□ -1.5
CUX1-220ENST00000607092 DYNC1I1O14576 645 aa5.71□□□□□ -1.5
CUX1-220ENST00000607092 TO15178 435 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms