RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 PLEKHM1Q9Y4G2 1056 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 MTCH2Q9Y6C9 303 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 PTPRJQ12913 1337 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 LRRN3E7EW58 273 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 PRR23D1E9PI22 279 aaPredicted RBP8.41□□□□□ -1.06
COMMD3-215ENST00000602574 EREGO14944 169 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 EIF3DO15371 548 aaKnown RBP eCLIP8.41□□□□□ -1.06
COMMD3-215ENST00000602574 OGG1O15527 345 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 FMO6PO60774 539 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 AKR7A3O95154 331 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 GDF11O95390 407 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 AP2A1O95782 977 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 RPLP1P05386 114 aaKnown RBP8.41□□□□□ -1.06
COMMD3-215ENST00000602574 PRR23D2P0DMB1 279 aaPredicted RBP8.41□□□□□ -1.06
COMMD3-215ENST00000602574 GABRA1P14867 456 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 PBX3P40426 434 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 ELP6Q0PNE2 266 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 CYP51A1Q16850 503 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 ZNF674Q2M3X9 581 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 ARSIQ5FYB1 569 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 TREML2Q5T2D2 321 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 N4BP2L1Q5TBK1 243 aaPredicted RBP8.41□□□□□ -1.06
COMMD3-215ENST00000602574 DMRTA1Q5VZB9 504 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 ZNF470Q6ECI4 717 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 IFNEQ86WN2 208 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 PROSER1Q86XN7 944 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 SPPL2CQ8IUH8 684 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 C10orf107Q8IVU9 208 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 RNASE8Q8TDE3 154 aaKnown RBP8.41□□□□□ -1.06
COMMD3-215ENST00000602574 TADA1Q96BN2 335 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 FAM120BQ96EK7 910 aaKnown RBP8.41□□□□□ -1.06
COMMD3-215ENST00000602574 NUDT11Q96G61 164 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 RBBP8Q99708 897 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 SPATA5L1Q9BVQ7 753 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 C1QTNF3Q9BXJ4 246 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 MRPL13Q9BYD1 178 aaKnown RBP8.41□□□□□ -1.06
COMMD3-215ENST00000602574 LRRN3Q9H3W5 708 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 TUBA4BQ9H853 241 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 FKRPQ9H9S5 495 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 CHST11Q9NPF2 352 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 ADARB2Q9NS39 739 aaKnown RBP8.41□□□□□ -1.06
COMMD3-215ENST00000602574 RXFP3Q9NSD7 469 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 TDP1Q9NUW8 608 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 NLKQ9UBE8 527 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 ACSL6Q9UKU0 697 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 SLC35A3Q9Y2D2 325 aa8.41□□□□□ -1.06
COMMD3-215ENST00000602574 G3V3Q6 166 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 BCKDKO14874 412 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 KIAA0513O60268 411 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 SPDEFO95238 335 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 ONECUT2O95948 504 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 NCF1P14598 390 aaPredicted RBP8.4□□□□□ -1.06
COMMD3-215ENST00000602574 PTPN3P26045 913 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 NDUFS1P28331 727 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 MATKP42679 507 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 EVX1P49640 407 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 NDUFV1P49821 464 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 RPL14P50914 215 aaKnown RBP8.4□□□□□ -1.06
COMMD3-215ENST00000602574 CNN3Q15417 329 aaKnown RBP8.4□□□□□ -1.06
COMMD3-215ENST00000602574 COQ5Q5HYK3 327 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 EOGTQ5NDL2 527 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 CNKSR3Q6P9H4 555 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 ALKAL1Q6UXT8 129 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 ERN2Q76MJ5 926 aaKnown RBP8.4□□□□□ -1.06
COMMD3-215ENST00000602574 SLITRK4Q8IW52 837 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 NAT16Q8N8M0 369 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 OR52N4Q8NGI2 321 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 CENPIQ92674 756 aaPredicted RBP8.4□□□□□ -1.06
COMMD3-215ENST00000602574 ZBED6CLQ96FA7 236 aaPredicted RBP8.4□□□□□ -1.06
COMMD3-215ENST00000602574 OTUB1Q96FW1 271 aaPredicted RBP8.4□□□□□ -1.06
COMMD3-215ENST00000602574 NECAB3Q96P71 396 aaPredicted RBP8.4□□□□□ -1.06
COMMD3-215ENST00000602574 SOSTQ9BQB4 213 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 ZNF426Q9BUY5 554 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 OR51J1Q9H342 316 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 RAB20Q9NX57 234 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 VNN3Q9NY84 501 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 TRPC4Q9UBN4 977 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 GDF2Q9UK05 429 aaPredicted RBP8.4□□□□□ -1.06
COMMD3-215ENST00000602574 PCDHB8Q9UN66 801 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 COLQQ9Y215 455 aaPredicted RBP8.4□□□□□ -1.06
COMMD3-215ENST00000602574 SLC27A6Q9Y2P4 619 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 ATG4BQ9Y4P1 393 aa8.4□□□□□ -1.06
COMMD3-215ENST00000602574 DDX60LQ5H9U9 1706 aaKnown RBP8.4□□□□□ -1.07
COMMD3-215ENST00000602574 KDM4FA0A1W2PPD8 638 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 FABP12A6NFH5 140 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 SPATA31C2B4DYI2 1134 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 RPL36A-HNRNPH2H7BZ11 118 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 OR10H3O60404 316 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 TPST1O60507 370 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 MT-ND1P03886 318 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 ADH1AP07327 375 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 NBEAP1P0C6P0 100 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 PEPDP12955 493 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 TFE3P19532 575 aaPredicted RBP8.4□□□□□ -1.07
COMMD3-215ENST00000602574 AZGP1P25311 298 aaKnown RBP8.4□□□□□ -1.07
COMMD3-215ENST00000602574 SLC6A1P30531 599 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 HOXA13P31271 388 aaPredicted RBP8.4□□□□□ -1.07
COMMD3-215ENST00000602574 DYNLL1P63167 89 aaKnown RBP8.4□□□□□ -1.07
COMMD3-215ENST00000602574 RSU1Q15404 277 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 SURF2Q15527 256 aaPredicted RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms