RNA–Protein interactions for RNA: ENST00000598329.2

SYMPK-210, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 1,000 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-210ENST00000598329 BBS4Q96RK4 519 aa11.55□□□□□ -0.56
SYMPK-210ENST00000598329 FAM173AQ9BQD7 235 aa11.55□□□□□ -0.56
SYMPK-210ENST00000598329 BRINP2Q9C0B6 783 aa11.55□□□□□ -0.56
SYMPK-210ENST00000598329 NXF5Q9H1B4 397 aaKnown RBP11.55□□□□□ -0.56
SYMPK-210ENST00000598329 ZDHHC11Q9H8X9 412 aa11.55□□□□□ -0.56
SYMPK-210ENST00000598329 MEAF6Q9HAF1 191 aa11.55□□□□□ -0.56
SYMPK-210ENST00000598329 SACM1LQ9NTJ5 587 aa11.55□□□□□ -0.56
SYMPK-210ENST00000598329 ARGLU1Q9NWB6 273 aaPredicted RBP11.55□□□□□ -0.56
SYMPK-210ENST00000598329 BAIAP2L1Q9UHR4 511 aa11.55□□□□□ -0.56
SYMPK-210ENST00000598329 CNOT11Q9UKZ1 510 aaKnown RBP11.55□□□□□ -0.56
SYMPK-210ENST00000598329 ZGRF1Q86YA3 2104 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 CROCCQ5TZA2 2017 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 FRG2CA6NGY1 282 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 UPK1AO00322 258 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 ASNA1O43681 348 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 ABCB1P08183 1280 aaPredicted RBP11.54□□□□□ -0.56
SYMPK-210ENST00000598329 CT45A8P0DMV1 189 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 CT45A9P0DMV2 189 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 CCL3P10147 92 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 ABCD3P28288 659 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 RPL3P39023 403 aaKnown RBP11.54□□□□□ -0.56
SYMPK-210ENST00000598329 MAP3K8P41279 467 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 TMED10P49755 219 aaKnown RBP11.54□□□□□ -0.56
SYMPK-210ENST00000598329 MEOX1P50221 254 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 NRG3P56975 720 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 ALDH6A1Q02252 535 aaKnown RBP11.54□□□□□ -0.56
SYMPK-210ENST00000598329 EXOSC7Q15024 291 aaKnown RBP11.54□□□□□ -0.56
SYMPK-210ENST00000598329 RPS6KA2Q15349 733 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 EIF2S3LQ2VIR3 472 aaKnown RBP11.54□□□□□ -0.56
SYMPK-210ENST00000598329 GALNTL6Q49A17 601 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 TTMPQ5BVD1 217 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 CT45A2Q5DJT8 189 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 TBCELQ5QJ74 424 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 HLA-DQA1Q5Y7H0 255 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 ATG16L1Q676U5 607 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 OGFOD2Q6N063 350 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 LARP4Q71RC2 724 aaKnown RBP eCLIP11.54□□□□□ -0.56
SYMPK-210ENST00000598329 R3HCC1LQ7Z5L2 792 aaKnown RBP11.54□□□□□ -0.56
SYMPK-210ENST00000598329 TRIM42Q8IWZ5 723 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 ANKRD42Q8N9B4 389 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 PSMA8Q8TAA3 256 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 RELTQ969Z4 430 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 ZBTB9Q96C00 473 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 ZBED6CLQ96FA7 236 aaPredicted RBP11.54□□□□□ -0.56
SYMPK-210ENST00000598329 TSSK3Q96PN8 268 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 GAL3ST4Q96RP7 486 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 ITPAQ9BY32 194 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 AKTIPQ9H8T0 292 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 NKIRAS1Q9NYS0 192 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 TAS2R9Q9NYW1 312 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 GIMAP2Q9UG22 337 aa11.54□□□□□ -0.56
SYMPK-210ENST00000598329 SPTAN1Q13813 2472 aaKnown RBP11.53□□□□□ -0.56
SYMPK-210ENST00000598329 PINLYPA6NC86 204 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 TTC36A6NLP5 189 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 SLCO1B7G3V0H7 640 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 SCAMP2O15127 329 aaKnown RBP11.53□□□□□ -0.56
SYMPK-210ENST00000598329 TRIM3O75382 744 aaPredicted RBP11.53□□□□□ -0.56
SYMPK-210ENST00000598329 SKAP2O75563 359 aaPredicted RBP11.53□□□□□ -0.56
SYMPK-210ENST00000598329 PPM1BO75688 479 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 ZNF24P17028 368 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 DDX5P17844 614 aaKnown RBP11.53□□□□□ -0.56
SYMPK-210ENST00000598329 PRPS1L1P21108 318 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 NTSP30990 170 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 PTGER1P34995 402 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 NCBP2P52298 156 aaKnown RBP eCLIP11.53□□□□□ -0.56
SYMPK-210ENST00000598329 CLDN8P56748 225 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 PSG6Q00889 435 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 SNTA1Q13424 505 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 CMPK2Q5EBM0 449 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 EXOSC6Q5RKV6 272 aaKnown RBP11.53□□□□□ -0.56
SYMPK-210ENST00000598329 IL23RQ5VWK5 629 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 GK5Q6ZS86 529 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 NUP54Q7Z3B4 507 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 FNDC5Q8NAU1 212 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 OR10G3Q8NGC4 313 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 SPPL2AQ8TCT8 520 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 KAT2AQ92830 837 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 HGDQ93099 445 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 PPCDCQ96CD2 204 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 TUBGCP3Q96CW5 907 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 MAELQ96JY0 434 aaKnown RBP11.53□□□□□ -0.56
SYMPK-210ENST00000598329 ANGPTL4Q9BY76 406 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 MANSC1Q9H8J5 431 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 IL1RL2Q9HB29 575 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 NOP53Q9NZM5 478 aaKnown RBP11.53□□□□□ -0.56
SYMPK-210ENST00000598329 SEC14L3Q9UDX4 400 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 BCAP29Q9UHQ4 241 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 MAPRE3Q9UPY8 281 aa11.53□□□□□ -0.56
SYMPK-210ENST00000598329 A0A0G2JMM0 328 aa11.52□□□□□ -0.57
SYMPK-210ENST00000598329 A0A1B0GVC2 190 aa11.52□□□□□ -0.57
SYMPK-210ENST00000598329 A0A1W2PPB8 328 aa11.52□□□□□ -0.57
SYMPK-210ENST00000598329 A0A1W2PRS3 328 aa11.52□□□□□ -0.57
SYMPK-210ENST00000598329 OR6C70A6NIJ9 312 aa11.52□□□□□ -0.57
SYMPK-210ENST00000598329 KIR3DP1A8MWS1 328 aa11.52□□□□□ -0.57
SYMPK-210ENST00000598329 HMGB1P1B2RPK0 211 aaPredicted RBP11.52□□□□□ -0.57
SYMPK-210ENST00000598329 ZNF195O14628 629 aa11.52□□□□□ -0.57
SYMPK-210ENST00000598329 TP53I11O14683 189 aa11.52□□□□□ -0.57
SYMPK-210ENST00000598329 ANKRD28O15084 1053 aa11.52□□□□□ -0.57
SYMPK-210ENST00000598329 HDAC3O15379 428 aa11.52□□□□□ -0.57
SYMPK-210ENST00000598329 PDPK1O15530 556 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms