RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CROCCQ5TZA2 2017 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 WWP2O00308 870 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 TO15178 435 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 ATXN7O15265 892 aaPredicted RBP9.77□□□□□ -0.85
LIG1-210ENST00000596332 ITGA10O75578 1167 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 OR2J2O76002 312 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 NEURL1O76050 574 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 SLITRK5O94991 958 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 NCF2P19878 526 aaPredicted RBP9.77□□□□□ -0.85
LIG1-210ENST00000596332 DRD5P21918 477 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 NTSP30990 170 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 S100A3P33764 101 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 CD96P40200 585 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 PPICP45877 212 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 CORO7P57737 925 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 IRX1P78414 480 aaPredicted RBP9.77□□□□□ -0.85
LIG1-210ENST00000596332 KLF10Q13118 480 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 GAB1Q13480 694 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 TUBA3CQ13748 450 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 SQLEQ14534 574 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 DPY19L1Q2PZI1 675 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 ZNF791Q3KP31 576 aaPredicted RBP9.77□□□□□ -0.85
LIG1-210ENST00000596332 GTDC1Q4AE62 458 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 VPS26BQ4G0F5 336 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 SOWAHCQ53LP3 525 aaPredicted RBP9.77□□□□□ -0.85
LIG1-210ENST00000596332 AGAP7PQ5VUJ5 663 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 TUBA3EQ6PEY2 450 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 DLEU7Q6UYE1 221 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 TMEM64Q6YI46 380 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 RNF111Q6ZNA4 994 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 LINC00696Q6ZRV3 163 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 GK5Q6ZS86 529 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 NATD1Q8N6N6 113 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 Q8NA96 180 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 MDS2Q8NDY4 140 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 C17orf47Q8NEP4 570 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 OR4N2Q8NGD1 307 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 TP53INP1Q96A56 240 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 ART5Q96L15 291 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 ZNF354BQ96LW1 612 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 RILPQ96NA2 401 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 AGAP4Q96P64 663 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 SIGLEC12Q96PQ1 595 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 BTBD9Q96Q07 612 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 OR52E6Q96RD3 313 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 PRPF18Q99633 342 aaKnown RBP9.77□□□□□ -0.85
LIG1-210ENST00000596332 LMF2Q9BU23 707 aaKnown RBP9.77□□□□□ -0.85
LIG1-210ENST00000596332 ITPAQ9BY32 194 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 RNF32Q9H0A6 362 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 FOLH1BQ9HBA9 442 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 PROK2Q9HC23 129 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 ZNF71Q9NQZ8 489 aaPredicted RBP9.77□□□□□ -0.85
LIG1-210ENST00000596332 GIMAP4Q9NUV9 329 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 ATAD3AQ9NVI7 634 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 FAM120CQ9NX05 1096 aaKnown RBP9.77□□□□□ -0.85
LIG1-210ENST00000596332 TAS2R9Q9NYW1 312 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 SLC25A37Q9NYZ2 338 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 CCDC167Q9P0B6 97 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 MAPRE3Q9UPY8 281 aa9.77□□□□□ -0.85
LIG1-210ENST00000596332 C2orf92A0A1B0GVN3 265 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 PRAMEF27A3QJZ7 478 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 MKRN2OSH3BPM6 223 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 EMC8O43402 210 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 WISP2O76076 250 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 OR6B1O95007 311 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 NKX2-2O95096 273 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 F10P00742 488 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 IGKV1D-16P01601 117 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 ALPPP05187 535 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 IL6P05231 212 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 ACP2P11117 423 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 SOX3P41225 446 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 CCT3P49368 545 aaKnown RBP9.76□□□□□ -0.85
LIG1-210ENST00000596332 RPS6KA2Q15349 733 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 MAPK11Q15759 364 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 MEP1AQ16819 746 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 AGKQ53H12 422 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 LRIF1Q5T3J3 769 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 AP1ARQ63HQ0 302 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 SAXO2Q658L1 398 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 SPINK14Q6IE38 97 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 MFSD12Q6NUT3 480 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 SLC2A7Q6PXP3 512 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 Q6ZS92 163 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 MDGA2Q7Z553 956 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 C10orf111Q8N326 155 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 SLC16A11Q8NCK7 471 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 NUP43Q8NFH3 380 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 FAM110BQ8TC76 370 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 RNF138Q8WVD3 245 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 SLC35A4Q96G79 324 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 MAGED4Q96JG8 741 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 BCAP29Q9UHQ4 241 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 YARS2Q9Y2Z4 477 aaKnown RBP9.76□□□□□ -0.85
LIG1-210ENST00000596332 PCDHGB7Q9Y5F8 929 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 GMEB1Q9Y692 573 aa9.76□□□□□ -0.85
LIG1-210ENST00000596332 A0A1W2PP18 115 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 GXYLT2A0PJZ3 443 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 CAPN14A8MX76 684 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 B4DXG7 233 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms