RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 FRG2BQ96QU4 278 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 ZBTB26Q9HCK0 441 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 SERHLQ9NQF3 203 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 MAT2BQ9NZL9 334 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 EHD3Q9NZN3 535 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 FETUBQ9UGM5 382 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 ADAM29Q9UKF5 820 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 CES1P1Q9UKY3 287 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 UTP11Q9Y3A2 253 aaKnown RBP14.89□□□□□ -0.03
LIG1-205ENST00000593425 PCDHA9Q9Y5H5 950 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 ACANP16112 2415 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 MED12Q93074 2177 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 UGT2B11O75310 529 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 HRGP04196 525 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 CYP4B1P13584 511 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 NAGAP17050 411 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 HOXC12P31275 282 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 PLCXD2Q0VAA5 305 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 UAP1Q16222 522 aaPredicted RBP14.88□□□□□ -0.03
LIG1-205ENST00000593425 CCNYL2Q5T2Q4 361 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 SLC30A6Q6NXT4 461 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 SLC48A1Q6P1K1 146 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 METTL2BQ6P1Q9 378 aaKnown RBP14.88□□□□□ -0.03
LIG1-205ENST00000593425 KLC3Q6P597 504 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 Q71RC1 249 aaPredicted RBP14.88□□□□□ -0.03
LIG1-205ENST00000593425 NUP54Q7Z3B4 507 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 LUZP2Q86TE4 346 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 METTL4Q8N3J2 472 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 ADCY4Q8NFM4 1077 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 RDH11Q8TC12 318 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 ATP6V1E2Q96A05 226 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 PHF21BQ96EK2 531 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 LCORQ96JN0 433 aaPredicted RBP14.88□□□□□ -0.03
LIG1-205ENST00000593425 YIPF4Q9BSR8 244 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 G6PC3Q9BUM1 346 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 NTMT1Q9BV86 223 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 RBM24Q9BX46 236 aaKnown RBP14.88□□□□□ -0.03
LIG1-205ENST00000593425 OR2B2Q9GZK3 357 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 VPS11Q9H270 941 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 GALNT8Q9NY28 637 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 KLRF1Q9NZS2 232 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 BCAP29Q9UHQ4 241 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 ZNF639Q9UID6 485 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 PCTPQ9UKL6 214 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 PLLPQ9Y342 182 aa14.88□□□□□ -0.03
LIG1-205ENST00000593425 A0A1B0GTL3 188 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 C1orf226A1L170 272 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 H0Y3Z8 333 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 CDH16O75309 829 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 ERN1O75460 977 aaKnown RBP14.87□□□□□ -0.03
LIG1-205ENST00000593425 ERAL1O75616 437 aaKnown RBP14.87□□□□□ -0.03
LIG1-205ENST00000593425 CBX7O95931 251 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 ATP1B1P05026 303 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 RHOXF2BP0C7M4 288 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 CPN1P15169 458 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 CD53P19397 219 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 TYK2P29597 1187 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 FEN1P39748 380 aaKnown RBP14.87□□□□□ -0.03
LIG1-205ENST00000593425 SERPINB8P50452 374 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 MAPK12P53778 367 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 DCAF7P61962 342 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 SRYQ05066 204 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 MAP4K2Q12851 820 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 LTB4RQ15722 352 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 SGO1Q5FBB7 561 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 TTC19Q6DKK2 380 aaPredicted RBP14.87□□□□□ -0.03
LIG1-205ENST00000593425 FAM180BQ6P0A1 224 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 RPS27LQ71UM5 84 aaKnown RBP14.87□□□□□ -0.03
LIG1-205ENST00000593425 COMMD6Q7Z4G1 85 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 ADGRE4PQ86SQ3 457 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 WDSUB1Q8N9V3 476 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 OR4F6Q8NGB9 312 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 SFXN3Q9BWM7 321 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 RAB17Q9H0T7 212 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 FARSBQ9NSD9 589 aaKnown RBP14.87□□□□□ -0.03
LIG1-205ENST00000593425 AHSPQ9NZD4 102 aa14.87□□□□□ -0.03
LIG1-205ENST00000593425 MED12LQ86YW9 2145 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 ESYT3A0FGR9 886 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 PRAMEF25A6NGN4 478 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 GOLGA6L10A6NI86 522 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 RCBTB2O95199 551 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 GOSR1O95249 250 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 LTBQ06643 244 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 GALNT1Q10472 559 aaPredicted RBP14.86□□□□□ -0.03
LIG1-205ENST00000593425 TRMT12Q53H54 448 aaKnown RBP14.86□□□□□ -0.03
LIG1-205ENST00000593425 PAGE2Q7Z2X7 111 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 BIVMQ86UB2 503 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 TRIM42Q8IWZ5 723 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 GCNT2Q8N0V5 402 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 OR52R1Q8NGF1 315 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 OR14L1PQ8NHC6 308 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 INTS12Q96CB8 462 aaKnown RBP14.86□□□□□ -0.03
LIG1-205ENST00000593425 CTHRC1Q96CG8 243 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 CLCF1Q9UBD9 225 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 XPR1Q9UBH6 696 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 SLC12A4Q9UP95 1085 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 EXO1Q9UQ84 846 aaKnown RBP14.86□□□□□ -0.03
LIG1-205ENST00000593425 CFL2Q9Y281 166 aa14.86□□□□□ -0.03
LIG1-205ENST00000593425 SH3D21A4FU49 640 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 STX16-NPEPL1H3BU86 382 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms