RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 TRIM49D1C9J1S8 452 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 DIAPH2O60879 1101 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 SBK3P0C264 359 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 NAGAP17050 411 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 NAGLUP54802 743 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 PLCXD2Q0VAA5 305 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 LTB4RQ15722 352 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 NUP54Q7Z3B4 507 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 C1orf52Q8N6N3 182 aaKnown RBP18.68■□□□□ 0.58
TRIM47-207ENST00000593089 FAM83FQ8NEG4 500 aaPredicted RBP18.68■□□□□ 0.58
TRIM47-207ENST00000593089 OR52R1Q8NGF1 315 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 IFT81Q8WYA0 676 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 NTNG2Q96CW9 530 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 OMA1Q96E52 524 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 RMND5BQ96G75 393 aaPredicted RBP18.68■□□□□ 0.58
TRIM47-207ENST00000593089 LCORQ96JN0 433 aaPredicted RBP18.68■□□□□ 0.58
TRIM47-207ENST00000593089 FOXC2Q99958 501 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 OSBPL11Q9BXB4 747 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 BRF2Q9HAW0 419 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 GALNT9Q9HCQ5 603 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 KLRF1Q9NZS2 232 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 ZNF639Q9UID6 485 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 ST6GALNAC2Q9UJ37 374 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 PLLPQ9Y342 182 aa18.68■□□□□ 0.58
TRIM47-207ENST00000593089 A6NNC1 897 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 ICOSLGO75144 302 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 CDH16O75309 829 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 URI1O94763 535 aaPredicted RBP18.67■□□□□ 0.58
TRIM47-207ENST00000593089 OR4F21O95013 312 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 CBX7O95931 251 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 TACR1P25103 407 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 CNTFP26441 200 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 SOX18P35713 384 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 CEBPEQ15744 281 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 FBXL19-AS1Q494R0 122 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 TRMT12Q53H54 448 aaKnown RBP18.67■□□□□ 0.58
TRIM47-207ENST00000593089 TEX35Q5T0J7 233 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 SLC30A6Q6NXT4 461 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 CDC20BQ86Y33 519 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 GOT1L1Q8NHS2 421 aaPredicted RBP18.67■□□□□ 0.58
TRIM47-207ENST00000593089 FAM222BQ8WU58 562 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 DCAKDQ8WVC6 231 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 FAIM2Q9BWQ8 316 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 DMGDHQ9UI17 866 aaKnown RBP18.67■□□□□ 0.58
TRIM47-207ENST00000593089 FOXD3Q9UJU5 478 aaPredicted RBP18.67■□□□□ 0.58
TRIM47-207ENST00000593089 PSME2Q9UL46 239 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 CBLCQ9ULV8 474 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 MAPRE3Q9UPY8 281 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 ZNF780BQ9Y6R6 833 aa18.67■□□□□ 0.58
TRIM47-207ENST00000593089 SETD2Q9BYW2 2564 aaPredicted RBP18.66■□□□□ 0.58
TRIM47-207ENST00000593089 AKAP6Q13023 2319 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 FAM221AA4D161 298 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 MBD3L4A6NDZ8 208 aaPredicted RBP18.66■□□□□ 0.58
TRIM47-207ENST00000593089 MBD3L3A6NE82 208 aaPredicted RBP18.66■□□□□ 0.58
TRIM47-207ENST00000593089 MBD3L5A6NJ08 208 aaPredicted RBP18.66■□□□□ 0.58
TRIM47-207ENST00000593089 CD8B2A6NJW9 211 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 SNPHO15079 494 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 UGT2B11O75310 529 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 ESRRBO95718 433 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 CD99P14209 185 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 PCSK2P16519 638 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 PTGDSP41222 190 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 MRPS35P82673 323 aaKnown RBP18.66■□□□□ 0.58
TRIM47-207ENST00000593089 TCHHL1Q5QJ38 904 aaPredicted RBP18.66■□□□□ 0.58
TRIM47-207ENST00000593089 TMEM81Q6P7N7 255 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 MBD3L2Q8NHZ7 208 aaPredicted RBP18.66■□□□□ 0.58
TRIM47-207ENST00000593089 CNRIP1Q96F85 164 aaPredicted RBP18.66■□□□□ 0.58
TRIM47-207ENST00000593089 DOCK7Q96N67 2140 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 FMO2Q99518 471 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 TSPYL1Q9H0U9 437 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 CXXC4Q9H2H0 198 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 SERHLQ9NQF3 203 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 PFDN4Q9NQP4 134 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 NMRK1Q9NWW6 199 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 TRPS1Q9UHF7 1281 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 ZNF225Q9UK10 706 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 PLEKHA6Q9Y2H5 1048 aa18.66■□□□□ 0.58
TRIM47-207ENST00000593089 ANKHD1Q8IWZ3 2542 aaKnown RBP18.66■□□□□ 0.58
TRIM47-207ENST00000593089 PRRC2AP48634 2157 aaKnown RBP18.65■□□□□ 0.58
TRIM47-207ENST00000593089 ZFHX3Q15911 3703 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 EEF1E1-BLOC1S5C9J1V9 151 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 ACOX3O15254 700 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 EEF1E1O43324 174 aaKnown RBP18.65■□□□□ 0.58
TRIM47-207ENST00000593089 ACTL6AO96019 429 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 CTSSP25774 331 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 GCKP35557 465 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 CLCQ05315 142 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 RCAN2Q14206 197 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 TMEM151AQ8N4L1 468 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 CDYL2Q8N8U2 506 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 C9orf106Q8NAJ2 232 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 RDH11Q8TC12 318 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 CTHRC1Q96CG8 243 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 TMUB1Q9BVT8 246 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 C1QTNF3Q9BXJ4 246 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 CALHM2Q9HA72 323 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 HEY2Q9UBP5 337 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 VPS29Q9UBQ0 182 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 PRODH2Q9UF12 536 aa18.65■□□□□ 0.58
TRIM47-207ENST00000593089 ZNF180Q9UJW8 692 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms