RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SCN4BQ8IWT1 228 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 PXYLP1Q8TE99 480 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 SLC25A28Q96A46 364 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 KIAA1143Q96AT1 154 aaPredicted RBP14.36□□□□□ -0.11
CIRBP-228ENST00000590347 DNAJC11Q9NVH1 559 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 RPH3AQ9Y2J0 694 aaPredicted RBP14.36□□□□□ -0.11
CIRBP-228ENST00000590347 PRSS21Q9Y6M0 314 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 VCANP13611 3396 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 PRRC2BQ5JSZ5 2229 aaKnown RBP14.36□□□□□ -0.11
CIRBP-228ENST00000590347 MEIKINA0A087WXM9 373 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 A0A0G2JPF8 293 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 TRBC2A0A5B9 178 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 HNRNPCL3B7ZW38 293 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 HHLA1C9JL84 531 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 RNF224P0DH78 156 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 HNRNPCL4P0DMR1 293 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 NR2F6P10588 404 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 GSG1Q2KHT4 349 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 PLK5Q496M5 336 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 SLC25A25Q6KCM7 469 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 ZCCHC12Q6PEW1 402 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 RBFAQ8N0V3 343 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 TOMM5Q8N4H5 51 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 TRPV1Q8NER1 839 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 DBF4BQ8NFT6 615 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 DPYSL5Q9BPU6 564 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 TREX2Q9BQ50 279 aaPredicted RBP14.36□□□□□ -0.11
CIRBP-228ENST00000590347 NTMQ9P121 344 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 SCP2D1Q9UJQ7 156 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 CHST2Q9Y4C5 530 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 C7orf66A4D0T2 115 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 SH3D21A4FU49 640 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 SGK494L7N484 410 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 POMCP01189 267 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 TRBC1P01850 177 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 WNT1P04628 370 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 ADRB1P08588 477 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 HIST1H2AGP0C0S8 130 aaPredicted RBP14.35□□□□□ -0.11
CIRBP-228ENST00000590347 OR4Q2P0C623 313 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 HIST1H2ADP20671 130 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 IL10RBQ08334 325 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 DCAF4L1Q3SXM0 396 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 UBXN11Q5T124 520 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 CD276Q5ZPR3 534 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 HIST2H2AA3Q6FI13 130 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 ACSM5Q6NUN0 579 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 C11orf65Q8NCR3 313 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 OR6K2Q8NGY2 324 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 FOXJ1Q92949 421 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 HIST1H2AHQ96KK5 128 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 HIST1H2AJQ99878 128 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 PELOQ9BRX2 385 aaKnown RBP14.35□□□□□ -0.11
CIRBP-228ENST00000590347 RPL36Q9Y3U8 105 aaKnown RBP14.35□□□□□ -0.11
CIRBP-228ENST00000590347 PIKFYVEQ9Y2I7 2098 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 F8W810 466 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 GABRPO00591 440 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 SIGLEC6O43699 453 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 SOD1P00441 154 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 PTHLHP12272 177 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 ELNP15502 786 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 CPEP16870 476 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 PREPP48147 710 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 BTG1P62324 171 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 PLD1Q13393 1074 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 KIAA1161Q6NSJ0 714 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 BBS10Q8TAM1 723 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 RNFT2Q96EX2 444 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 PEX11GQ96HA9 241 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 SAMD11Q96NU1 681 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 RPRD1AQ96P16 312 aaPredicted RBP14.35□□□□□ -0.11
CIRBP-228ENST00000590347 POLR2J3Q9H1A7 115 aaKnown RBP14.35□□□□□ -0.11
CIRBP-228ENST00000590347 AUNIPQ9H7T9 357 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 ZDHHC4Q9NPG8 344 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 GSN-AS1Q9NRJ2 163 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 RASD1Q9Y272 281 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 SMIM35A0A1B0GVV1 85 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 FFAR1O14842 300 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 SLC25A14O95258 325 aaPredicted RBP14.35□□□□□ -0.11
CIRBP-228ENST00000590347 AHCYP23526 432 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 SOAT1P35610 550 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 ZNF140P52738 457 aaPredicted RBP14.35□□□□□ -0.11
CIRBP-228ENST00000590347 LIM2P55344 173 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 WNT4P56705 351 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 C3orf38Q5JPI3 329 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 AFTPHQ6ULP2 937 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 QSOX2Q6ZRP7 698 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 RNF180Q86T96 592 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 OR4A15Q8NGL6 344 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 ADAMTS14Q8WXS8 1223 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 NSMAFQ92636 917 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 TADA1Q96BN2 335 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 NKX6-2Q9C056 277 aaPredicted RBP14.35□□□□□ -0.11
CIRBP-228ENST00000590347 POLR1EQ9GZS1 481 aaKnown RBP14.35□□□□□ -0.11
CIRBP-228ENST00000590347 NT5DC2Q9H857 520 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 GPATCH2Q9NW75 528 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 KIF25Q9UIL4 384 aa14.35□□□□□ -0.11
CIRBP-228ENST00000590347 SF3B6Q9Y3B4 125 aaKnown RBP14.35□□□□□ -0.11
CIRBP-228ENST00000590347 PLXNB2O15031 1838 aa14.34□□□□□ -0.11
CIRBP-228ENST00000590347 SAP18O00422 153 aaKnown RBP14.34□□□□□ -0.11
CIRBP-228ENST00000590347 SCN2BO60939 215 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms