RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 CES1P1Q9UKY3 287 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 PSME2Q9UL46 239 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 TMCO1Q9UM00 188 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 MRPS18CQ9Y3D5 142 aaKnown RBP12.74□□□□□ -0.37
VMP1-209ENST00000588915 A0A1W2PS29 197 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 GOLGA6L10A6NI86 522 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 A8MXE2 369 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 CASKO14936 926 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 GBAP04062 536 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 ATP1B1P05026 303 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 DRD5P21918 477 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 PPICP45877 212 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 AGFG1P52594 562 aaKnown RBP12.73□□□□□ -0.37
VMP1-209ENST00000588915 DIO3P55073 304 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 NKX6-1P78426 367 aaPredicted RBP12.73□□□□□ -0.37
VMP1-209ENST00000588915 GUCY2DQ02846 1103 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 MGAT2Q10469 447 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 CCNYL2Q5T2Q4 361 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 SLC48A1Q6P1K1 146 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 YRDCQ86U90 279 aaKnown RBP12.73□□□□□ -0.37
VMP1-209ENST00000588915 TRIM42Q8IWZ5 723 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 LRRC75A-AS1Q8N1F1 130 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 VWA5B2Q8N398 1253 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 SPATA4Q8NEY3 305 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 ATP6V1E2Q96A05 226 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 CTHRC1Q96CG8 243 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 GPR78Q96P69 363 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 PIP5K1AQ99755 562 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 TUBA1CQ9BQE3 449 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 LRRC1Q9BTT6 524 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 KCNF1Q9H3M0 494 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 PRODH2Q9UF12 536 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 UTP11Q9Y3A2 253 aaKnown RBP12.73□□□□□ -0.37
VMP1-209ENST00000588915 PCDHA9Q9Y5H5 950 aa12.73□□□□□ -0.37
VMP1-209ENST00000588915 SH3D21A4FU49 640 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 TO15178 435 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 RAD51CO43502 376 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 ABCB7O75027 752 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 CRHP06850 196 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 KLK1P06870 262 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 CSNK2A2P19784 350 aaPredicted RBP12.72□□□□□ -0.37
VMP1-209ENST00000588915 ADSLP30566 484 aaPredicted RBP12.72□□□□□ -0.37
VMP1-209ENST00000588915 DEKP35659 375 aaKnown RBP12.72□□□□□ -0.37
VMP1-209ENST00000588915 PTGDSP41222 190 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 SLCO1A2P46721 670 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 CCNG1P51959 295 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 PLTPP55058 493 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 GFRA1P56159 465 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 PSPHP78330 225 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 IRF9Q00978 393 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 FOXF2Q12947 444 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 GGTA1PQ4G0N0 100 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 AAGABQ6PD74 315 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 PRR22Q8IZ63 422 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 METTL4Q8N3J2 472 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 WDSUB1Q8N9V3 476 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 TMCO6Q96DC7 493 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 OMA1Q96E52 524 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 NODALQ96S42 347 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 RAB17Q9H0T7 212 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 NOL11Q9H8H0 719 aaKnown RBP12.72□□□□□ -0.37
VMP1-209ENST00000588915 GALNT8Q9NY28 637 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 MAT2BQ9NZL9 334 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 KLRF1Q9NZS2 232 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 CLCF1Q9UBD9 225 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 EIF3LQ9Y262 564 aaKnown RBP12.72□□□□□ -0.37
VMP1-209ENST00000588915 KIAA1549Q9HCM3 1950 aa12.72□□□□□ -0.37
VMP1-209ENST00000588915 EXPH5Q8NEV8 1989 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 A0A096LPK6 155 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 HMX2A2RU54 273 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 LRRC14BA6NHZ5 514 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 OR6C70A6NIJ9 312 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 H0Y3Z8 333 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 STX16-NPEPL1H3BU86 382 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 OR7A17O14581 309 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 STX16O14662 325 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 MSTNO14793 375 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 BCAS2O75934 225 aaPredicted RBP12.71□□□□□ -0.37
VMP1-209ENST00000588915 SIX3O95343 332 aaPredicted RBP12.71□□□□□ -0.37
VMP1-209ENST00000588915 RBP1P09455 135 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 TYK2P29597 1187 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 SRD5A2P31213 254 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 CPA2P48052 419 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 MAPK12P53778 367 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 TRA2BP62995 288 aaKnown RBP12.71□□□□□ -0.37
VMP1-209ENST00000588915 MRPS25P82663 173 aaKnown RBP12.71□□□□□ -0.37
VMP1-209ENST00000588915 PLCXD2Q0VAA5 305 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 IFT88Q13099 833 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 BCL2A1Q16548 175 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 MROH9Q5TGP6 573 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 TTC19Q6DKK2 380 aaPredicted RBP12.71□□□□□ -0.37
VMP1-209ENST00000588915 FAM111BQ6SJ93 734 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 PRSS57Q6UWY2 283 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 LUZP2Q86TE4 346 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 IFNEQ86WN2 208 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 CXorf67Q86X51 503 aaPredicted RBP12.71□□□□□ -0.37
VMP1-209ENST00000588915 KRTAP1-3Q8IUG1 177 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 GBP7Q8N8V2 638 aaPredicted RBP12.71□□□□□ -0.37
VMP1-209ENST00000588915 OR52B6Q8NGF0 335 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 OR14L1PQ8NHC6 308 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms