RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 FAM111BQ6SJ93 734 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 ZNF572Q7Z3I7 529 aaPredicted RBP17.65■□□□□ 0.42
TRAF4-216ENST00000586813 YRDCQ86U90 279 aaKnown RBP17.65■□□□□ 0.42
TRAF4-216ENST00000586813 MMP21Q8N119 569 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 OR4F6Q8NGB9 312 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 TRPC4APQ8TEL6 797 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 HGDQ93099 445 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 ISL2Q96A47 359 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 MBD6Q96DN6 1003 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 OMA1Q96E52 524 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 OSBPL11Q9BXB4 747 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 ELOVL6Q9H5J4 265 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 CALHM2Q9HA72 323 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 BCAP29Q9UHQ4 241 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 A0A1B0GTL3 188 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 SNPHO15079 494 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 GUCY1B2O75343 617 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 ACTL6AO96019 429 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 RHOXF2BP0C7M4 288 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 EPXP11678 715 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 OPRM1P35372 400 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 FEN1P39748 380 aaKnown RBP17.64■□□□□ 0.41
TRAF4-216ENST00000586813 PTGDSP41222 190 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 PLCXD2Q0VAA5 305 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 GALNT1Q10472 559 aaPredicted RBP17.64■□□□□ 0.41
TRAF4-216ENST00000586813 FBXW10Q5XX13 1052 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 SLC30A6Q6NXT4 461 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 NUP54Q7Z3B4 507 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 CAMKMTQ7Z624 323 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 C9orf106Q8NAJ2 232 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 SIMC1Q8NDZ2 872 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 LCORQ96JN0 433 aaPredicted RBP17.64■□□□□ 0.41
TRAF4-216ENST00000586813 NODALQ96S42 347 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 GALNT9Q9HCQ5 603 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 FARSBQ9NSD9 589 aaKnown RBP17.64■□□□□ 0.41
TRAF4-216ENST00000586813 NINJ2Q9NZG7 142 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 JKAMPQ9P055 326 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 ZNF639Q9UID6 485 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 SLC12A4Q9UP95 1085 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 PLLPQ9Y342 182 aa17.64■□□□□ 0.41
TRAF4-216ENST00000586813 NIPBLQ6KC79 2804 aaeCLIP17.64■□□□□ 0.412e-8■■■□□ 17.1
TRAF4-216ENST00000586813 MED12LQ86YW9 2145 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 ACOX3O15254 700 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 ICOSLGO75144 302 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 SMIM24O75264 130 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 ERAL1O75616 437 aaKnown RBP17.63■□□□□ 0.41
TRAF4-216ENST00000586813 CBX7O95931 251 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 IL18BPO95998 194 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 RAF1P04049 648 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 RPS17P08708 135 aaKnown RBP17.63■□□□□ 0.41
TRAF4-216ENST00000586813 TMIGD3P0DMS9 266 aaPredicted RBP17.63■□□□□ 0.41
TRAF4-216ENST00000586813 CYP4B1P13584 511 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 CSNK2A2P19784 350 aaPredicted RBP17.63■□□□□ 0.41
TRAF4-216ENST00000586813 GCKP35557 465 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 DEKP35659 375 aaKnown RBP17.63■□□□□ 0.41
TRAF4-216ENST00000586813 SOX18P35713 384 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 SNTA1Q13424 505 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 C8orf74Q6P047 294 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 MILR1Q7Z6M3 343 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 ADCY4Q8NFM4 1077 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 LINC01560Q8TB33 94 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 ZPLD1Q8TCW7 415 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 SLC44A1Q8WWI5 657 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 ANP32BQ92688 251 aaKnown RBP17.63■□□□□ 0.41
TRAF4-216ENST00000586813 KLHL29Q96CT2 875 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 SERHLQ9NQF3 203 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 EHD3Q9NZN3 535 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 KLRF1Q9NZS2 232 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 MAPRE3Q9UPY8 281 aa17.63■□□□□ 0.41
TRAF4-216ENST00000586813 C2orf72A6NCS6 295 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 UGT2B11O75310 529 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 ATE1O95260 518 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 CPN1P15169 458 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 HOXB4P17483 251 aaPredicted RBP17.62■□□□□ 0.41
TRAF4-216ENST00000586813 CNTFP26441 200 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 SLCO1A2P46721 670 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 ETF1P62495 437 aaKnown RBP17.62■□□□□ 0.41
TRAF4-216ENST00000586813 ADAM8P78325 824 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 DUSP2Q05923 314 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 LTB4RQ15722 352 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 TSNAXIP1Q2TAA8 658 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 LETMD1Q6P1Q0 360 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 SYT10Q6XYQ8 523 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 RPS27LQ71UM5 84 aaKnown RBP17.62■□□□□ 0.41
TRAF4-216ENST00000586813 OR52R1Q8NGF1 315 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 TM4SF18Q96CE8 201 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 CTHRC1Q96CG8 243 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 TUBA1CQ9BQE3 449 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 OR2B2Q9GZK3 357 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 BRF2Q9HAW0 419 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 DLL4Q9NR61 685 aa17.62■□□□□ 0.41
TRAF4-216ENST00000586813 PRAMEF25A6NGN4 478 aa17.61■□□□□ 0.41
TRAF4-216ENST00000586813 H0Y3Z8 333 aa17.61■□□□□ 0.41
TRAF4-216ENST00000586813 OTCP00480 354 aa17.61■□□□□ 0.41
TRAF4-216ENST00000586813 PDYNP01213 254 aa17.61■□□□□ 0.41
TRAF4-216ENST00000586813 INHBAP08476 426 aa17.61■□□□□ 0.41
TRAF4-216ENST00000586813 FOXF2Q12947 444 aa17.61■□□□□ 0.41
TRAF4-216ENST00000586813 TRMT12Q53H54 448 aaKnown RBP17.61■□□□□ 0.41
TRAF4-216ENST00000586813 FAM180BQ6P0A1 224 aa17.61■□□□□ 0.41
TRAF4-216ENST00000586813 RELL1Q8IUW5 271 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms