RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 NUBP2Q9Y5Y2 271 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 CDH10Q9Y6N8 788 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 A0A1B0GVI7 797 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 OR6C75A6NL08 312 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 ANXA2P2A6NMY6 339 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 C1orf196B1AJZ1 125 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 KHDRBS3O75525 346 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 SIX6O95475 246 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 HLA-DQB1P01920 261 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 LINC00271P0C7V0 271 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 C6P13671 934 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 CXCL3P19876 107 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 YWHAQP27348 245 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 MSX1P28360 303 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 CSRP3P50461 194 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 TPI1P60174 286 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 TIMM50Q3ZCQ8 353 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 C10orf120Q5SQS8 335 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 GCNT7Q6ZNI0 430 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 SKA3Q8IX90 412 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 OR1S1Q8NH92 325 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 ZNF675Q8TD23 568 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 TMEM125Q96AQ2 219 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 KIAA1143Q96AT1 154 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 TADA1Q96BN2 335 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 LRRC58Q96CX6 371 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 BSCL2Q96G97 398 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 MTIF3Q9H2K0 278 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 TMPRSS5Q9H3S3 457 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 RHOJQ9H4E5 214 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 XKR8Q9H6D3 395 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 MPP6Q9NZW5 540 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 PHF11Q9UIL8 331 aa11.27□□□□□ -0.61
CDK5RAP3-232ENST00000584168 CXorf65A6NEN9 183 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 ERI2A8K979 691 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 DISC1C4P0D8 188 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 GTPBP1O00178 669 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 RECKO95980 971 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 IRF1P10914 325 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 PRKACGP22612 351 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 GDI1P31150 447 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 RORCP51449 518 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 ELP6Q0PNE2 266 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 TWF1Q12792 350 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 CTBP1Q13363 440 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 SHHQ15465 462 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 ALKAL2Q6UX46 152 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 PROSER1Q86XN7 944 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 ADGRF3Q8IZF5 1079 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 SPAG16Q8N0X2 631 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 MYEOVQ96EZ4 313 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 CCNL2Q96S94 520 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 TSNAXQ99598 290 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 ABCB9Q9NP78 766 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 ZFP57Q9NU63 452 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 GFOD1Q9NXC2 390 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 PLEKHA6Q9Y2H5 1048 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 ZNF451Q9Y4E5 1061 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 PTPRSQ13332 1948 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 SLC38A8A6NNN8 435 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 GPR31O00270 319 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 GNGT2O14610 69 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 KLHL18O94889 574 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 AKR7A3O95154 331 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 IFNA10P01566 189 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 CA3P07451 260 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 SLC2A2P11168 524 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 HRH2P25021 359 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 RPS19P39019 145 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 MAD2L1BPQ15013 274 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 DHCR24Q15392 516 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 CD276Q5ZPR3 534 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 NADSYN1Q6IA69 706 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 CAPN13Q6MZZ7 669 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 ZNF574Q6ZN55 896 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 CEP97Q8IW35 865 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 PUSL1Q8N0Z8 303 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 WBP2Q969T9 261 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 TCF25Q9BQ70 676 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 OCSTAMPQ9BR26 566 aa11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 TMEFF2Q9UIK5 374 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-232ENST00000584168 A0A096LPI6 279 aa11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 C2orf78A6NCI8 922 aa11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 TMEM200CA6NKL6 621 aa11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 TMEM210A6NLX4 147 aa11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 H7C4K7 107 aa11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 RFXAPO00287 272 aa11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 FOXE1O00358 373 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 KRT33AO76009 404 aa11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 CST1P01037 141 aa11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 JCHAINP01591 159 aa11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 ATXN1LP0C7T5 689 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 C21orf33P30042 268 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 DDTP30046 118 aa11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 HTR5AP47898 357 aa11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 DIO1P49895 249 aa11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 FOXM1Q08050 763 aa11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 ELAVL2Q12926 359 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 MADCAM1Q13477 382 aa11.25□□□□□ -0.61
CDK5RAP3-232ENST00000584168 TRAM1Q15629 374 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms