RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 MCCC2Q9HCC0 563 aa19.21■□□□□ 0.67
CCDC42-203ENST00000581598 NPDC1Q9NQX5 325 aaPredicted RBP19.21■□□□□ 0.67
CCDC42-203ENST00000581598 FARSBQ9NSD9 589 aaKnown RBP19.21■□□□□ 0.67
CCDC42-203ENST00000581598 B4GALT7Q9UBV7 327 aa19.21■□□□□ 0.67
CCDC42-203ENST00000581598 ACAD8Q9UKU7 415 aa19.21■□□□□ 0.67
CCDC42-203ENST00000581598 NPFFR2Q9Y5X5 522 aa19.21■□□□□ 0.67
CCDC42-203ENST00000581598 DCHS2Q6V1P9 2916 aa19.21■□□□□ 0.67
CCDC42-203ENST00000581598 FAM47E-STBD1D6RA91 191 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 ATP1B1P05026 303 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 GLI4P10075 376 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 HSD3B1P14060 373 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 S1PR1P21453 382 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 HSD3B2P26439 372 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 PRKAA2P54646 552 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 NRG3P56975 720 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 CLCQ05315 142 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 MAP4K2Q12851 820 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 C1orf185Q5T7R7 199 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 CCDC71Q8IV32 467 aaPredicted RBP19.2■□□□□ 0.66
CCDC42-203ENST00000581598 NEIL3Q8TAT5 605 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 SPPL2AQ8TCT8 520 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 MGARPQ8TDB4 240 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 NTNG2Q96CW9 530 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 CCDC126Q96EE4 140 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 ZNF597Q96LX8 424 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 UCK2Q9BZX2 261 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 EXO5Q9H790 373 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 OXSMQ9NWU1 459 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 SPRR3Q9UBC9 169 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 CFL2Q9Y281 166 aa19.2■□□□□ 0.66
CCDC42-203ENST00000581598 NKX2-6A6NCS4 301 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 FAM90A27PA6NNH2 459 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 SNX4O95219 450 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 NAGAP17050 411 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 NT5EP21589 574 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 ALDH3A1P30838 453 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 ZFP36L2P47974 494 aaKnown RBP19.19■□□□□ 0.66
CCDC42-203ENST00000581598 DNAJB13P59910 316 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 RPP38P78345 283 aaKnown RBP19.19■□□□□ 0.66
CCDC42-203ENST00000581598 TLE4Q04727 773 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 PRICKLE4Q2TBC4 344 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 SGO1Q5FBB7 561 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 ZNF678Q5SXM1 525 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 TMEM198Q66K66 360 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 SLC22A9Q8IVM8 553 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 C10orf107Q8IVU9 208 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 DIO2Q92813 273 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 TM4SF18Q96CE8 201 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 ZNF382Q96SR6 550 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 MECRQ9BV79 373 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 ANGPTL4Q9BY76 406 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 INTS9Q9NV88 658 aaKnown RBP19.19■□□□□ 0.66
CCDC42-203ENST00000581598 TNFRSF10DQ9UBN6 386 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 ZNF639Q9UID6 485 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 PSME2Q9UL46 239 aa19.19■□□□□ 0.66
CCDC42-203ENST00000581598 OR4F21O95013 312 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 CSNK2A2P19784 350 aaPredicted RBP19.18■□□□□ 0.66
CCDC42-203ENST00000581598 GPX3P22352 226 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 FBXW4P57775 412 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 MGAT2Q10469 447 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 CSTF3Q12996 717 aaKnown RBP19.18■□□□□ 0.66
CCDC42-203ENST00000581598 UNC50Q53HI1 259 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 LIPMQ5VYY2 423 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 TMEM81Q6P7N7 255 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 MTERF4Q7Z6M4 381 aaKnown RBP19.18■□□□□ 0.66
CCDC42-203ENST00000581598 DMRTC2Q8IXT2 367 aaPredicted RBP19.18■□□□□ 0.66
CCDC42-203ENST00000581598 VWA5B2Q8N398 1253 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 OR6Y1Q8NGX8 325 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 CTHRC1Q96CG8 243 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 FAIM2Q9BWQ8 316 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 SLC24A3Q9HC58 644 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 MAT2BQ9NZL9 334 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 VPS29Q9UBQ0 182 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 STK38LQ9Y2H1 464 aa19.18■□□□□ 0.66
CCDC42-203ENST00000581598 A0A0G2JNJ9 132 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 MANBAO00462 879 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 TRIM13O60858 407 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 KRT6AP02538 564 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 KRT6BP04259 564 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 TSPAN8P19075 237 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 IMPDH1P20839 514 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 ABCD3P28288 659 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 KRT6CP48668 564 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 RIPPLY2Q5TAB7 128 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 TMEM64Q6YI46 380 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 NUDCD3Q8IVD9 361 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 C1orf52Q8N6N3 182 aaKnown RBP19.17■□□□□ 0.66
CCDC42-203ENST00000581598 OR10Q1Q8NGQ4 319 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 L3HYPDHQ96EM0 354 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 JSRP1Q96MG2 331 aaPredicted RBP19.17■□□□□ 0.66
CCDC42-203ENST00000581598 PAIP2Q9BPZ3 127 aaKnown RBP19.17■□□□□ 0.66
CCDC42-203ENST00000581598 SLC6A15Q9H2J7 730 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 UBQLN3Q9H347 655 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 Q9UFV3 132 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 POLQO75417 2590 aa19.17■□□□□ 0.66
CCDC42-203ENST00000581598 CCDC168Q8NDH2 2452 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 SUPT7LO94864 414 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 LRATO95237 230 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 HPNP05981 417 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 GDF1P27539 372 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms