RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 BNC2Q6ZN30 1099 aaPredicted RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 Q6ZSR9 355 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 NUP54Q7Z3B4 507 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 R3HCC1LQ7Z5L2 792 aaKnown RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 SLC44A2Q8IWA5 706 aaPredicted RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 KIRREL3Q8IZU9 778 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 EID3Q8N140 333 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 FNDC5Q8NAU1 212 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 OR52N2Q8NGI0 321 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 OR2T11Q8NH01 316 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 CLHC1Q8NHS4 586 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 ZFP28Q8NHY6 868 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 TMCO6Q96DC7 493 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 ERP27Q96DN0 273 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 HSPBAP1Q96EW2 488 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 CHMP6Q96FZ7 201 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 EGLN2Q96KS0 407 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF681Q96N22 645 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 NXF5Q9H1B4 397 aaKnown RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 REEP4Q9H6H4 257 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 ANKRA2Q9H9E1 313 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 IL1RL2Q9HB29 575 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 DEPPQ9NTK1 212 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 RYDENQ9NUL5 291 aaKnown RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 DDX18Q9NVP1 670 aaKnown RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 TUBA8Q9NY65 449 aaPredicted RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 TAS2R7Q9NYW3 318 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 MAT2BQ9NZL9 334 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 KLRF1Q9NZS2 232 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 ZDHHC2Q9UIJ5 367 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 MRTO4Q9UKD2 239 aaKnown RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 ACAD8Q9UKU7 415 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 DOCK10Q96BY6 2186 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 A0A0G2JMM0 328 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 A0A1W2PPB8 328 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 A0A1W2PRS3 328 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 TMEM120BA0PK00 339 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 PINLYPA6NC86 204 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 KIR3DP1A8MWS1 328 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 MYO1GB0I1T2 1018 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 NPIPA2E9PIF3 369 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 NPIPA3F8WFD2 350 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 LSM1O15116 133 aaKnown RBP6.03□□□□□ -1.44
TRAF4-213ENST00000578917 ACOX3O15254 700 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 CFLARO15519 480 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 PDPK1O15530 556 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 ZNHIT1O43257 154 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 PLOD3O60568 738 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 ZG16O60844 167 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 ERN1O75460 977 aaKnown RBP6.03□□□□□ -1.44
TRAF4-213ENST00000578917 PPM1BO75688 479 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 WISP2O76076 250 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 SLITRK5O94991 958 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 NADKO95544 446 aaPredicted RBP6.03□□□□□ -1.44
TRAF4-213ENST00000578917 CBX7O95931 251 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 ABCB1P08183 1280 aaPredicted RBP6.03□□□□□ -1.44
TRAF4-213ENST00000578917 PRPS2P11908 318 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 BCKDHAP12694 445 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 GP1BBP13224 206 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 NAGAP17050 411 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 PRPH2P23942 346 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 GDF1P27539 372 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 ABCD3P28288 659 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 GCKP35557 465 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 RPL3P39023 403 aaKnown RBP6.03□□□□□ -1.44
TRAF4-213ENST00000578917 MC3RP41968 323 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 ETV4P43268 484 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 MAGEA5P43359 124 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 RFX3P48380 749 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 MAN2A2P49641 1150 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 CLK3P49761 638 aaKnown RBP6.03□□□□□ -1.44
TRAF4-213ENST00000578917 SMSP52788 366 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 CORO7P57737 925 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 PSPHP78330 225 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 SRSF1Q07955 248 aaKnown RBP eCLIP6.03□□□□□ -1.44
TRAF4-213ENST00000578917 MGAT2Q10469 447 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF155Q12901 538 aaPredicted RBP6.03□□□□□ -1.44
TRAF4-213ENST00000578917 MPP2Q14168 576 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 CASP8Q14790 479 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 KIAA0040Q15053 153 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 PDCD2Q16342 344 aaPredicted RBP6.03□□□□□ -1.44
TRAF4-213ENST00000578917 C3AR1Q16581 482 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 NTRK2Q16620 822 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 PGS1Q32NB8 556 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 UGT3A2Q3SY77 523 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 VPS26BQ4G0F5 336 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF628Q5EBL2 1059 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 CMPK2Q5EBM0 449 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 TBCELQ5QJ74 424 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 C6orf136Q5SQH8 315 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 BEND6Q5SZJ8 279 aaPredicted RBP6.03□□□□□ -1.44
TRAF4-213ENST00000578917 CPTPQ5TA50 214 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 IL23RQ5VWK5 629 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 ATG16L1Q676U5 607 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 LARP4Q71RC2 724 aaKnown RBP eCLIP6.03□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF551Q7Z340 670 aaPredicted RBP6.03□□□□□ -1.44
TRAF4-213ENST00000578917 SIAH3Q8IW03 269 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 TRIM42Q8IWZ5 723 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 FBXW8Q8N3Y1 598 aa6.03□□□□□ -1.44
TRAF4-213ENST00000578917 LIX1Q8N485 282 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms