RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 CD1EP15812 388 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 SOX11P35716 441 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 CDKN2CP42773 168 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 PSPHP78330 225 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 RHDQ02161 417 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 TP53BP2Q13625 1128 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 ZCCHC12Q6PEW1 402 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 RPS19BP1Q86WX3 136 aaKnown RBP15.84■□□□□ 0.13
NUP88-210ENST00000574867 DPP10Q8N608 796 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 FDCSPQ8NFU4 85 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 EXTL1Q92935 676 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 TP53INP1Q96A56 240 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 CMTM5Q96DZ9 223 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 VSTM2LQ96N03 204 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 BTBD9Q96Q07 612 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 PHF12Q96QT6 1004 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 SLC35A5Q9BS91 424 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 FOLH1BQ9HBA9 442 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 MYOTQ9UBF9 498 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 ERVK-11Q9UQG0 969 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 PKD1L2Q7Z442 2459 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 CPAMD8Q8IZJ3 1885 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 CAPN14A8MX76 684 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 MKRN2OSH3BPM6 223 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 KRT16P08779 473 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 PRDX6P30041 224 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 PRKAG1P54619 331 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 POLE2P56282 527 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 ZNHIT3Q15649 155 aaPredicted RBP15.83■□□□□ 0.13
NUP88-210ENST00000574867 MEP1AQ16819 746 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 COL28A1Q2UY09 1125 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 PAGE3Q5JUK9 113 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 LRIF1Q5T3J3 769 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 TCTN3Q6NUS6 607 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 ZNF621Q6ZSS3 439 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 TREML1Q86YW5 311 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 ZNF441Q8N8Z8 693 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 CDRT4Q8N9R6 151 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 OR5AK3PQ8NH89 298 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 GIMAP5Q96F15 307 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 ITPAQ9BY32 194 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 ABI3Q9P2A4 366 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 DTX4Q9Y2E6 619 aa15.83■□□□□ 0.13
NUP88-210ENST00000574867 USP24Q9UPU5 2620 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 TMEM200CA6NKL6 621 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 CDK2AP1O14519 115 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 PTPN6P29350 595 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 PRIM2P49643 509 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 MLF1P58340 268 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 MMEL1Q495T6 779 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 ACER2Q5QJU3 275 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 ABHD17BQ5VST6 288 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 MFSD12Q6NUT3 480 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 C19orf48Q6RUI8 117 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 ISLR2Q6UXK2 745 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 THAP3Q8WTV1 239 aaPredicted RBP15.83■□□□□ 0.12
NUP88-210ENST00000574867 ADIPOR1Q96A54 375 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 NEURL3Q96EH8 262 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 LMF2Q9BU23 707 aaKnown RBP15.83■□□□□ 0.12
NUP88-210ENST00000574867 PAIP1Q9H074 479 aaKnown RBP15.83■□□□□ 0.12
NUP88-210ENST00000574867 ZNF552Q9H707 407 aaPredicted RBP15.83■□□□□ 0.12
NUP88-210ENST00000574867 EQTNQ9NQ60 294 aa15.83■□□□□ 0.12
NUP88-210ENST00000574867 LAMA5O15230 3695 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 NUP214P35658 2090 aaPredicted RBP15.82■□□□□ 0.12
NUP88-210ENST00000574867 LOC100653049A0A140TA62 436 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 FRG2CA6NGY1 282 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 KRT34O76011 436 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 HMGN2P05204 90 aaKnown RBP15.82■□□□□ 0.12
NUP88-210ENST00000574867 GSNP06396 782 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 COX4I1P13073 169 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 CHI3L1P36222 383 aaPredicted RBP15.82■□□□□ 0.12
NUP88-210ENST00000574867 PPICP45877 212 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 RAPSNQ13702 412 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 SAXO2Q658L1 398 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 REP15Q6BDI9 236 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 RETREG3Q86VR2 466 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 SLC22A8Q8TCC7 542 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 HOXB13Q92826 284 aaPredicted RBP15.82■□□□□ 0.12
NUP88-210ENST00000574867 LCORQ96JN0 433 aaPredicted RBP15.82■□□□□ 0.12
NUP88-210ENST00000574867 GPATCH2Q9NW75 528 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 FAF1Q9UNN5 650 aaPredicted RBP15.82■□□□□ 0.12
NUP88-210ENST00000574867 GPR55Q9Y2T6 319 aaPredicted RBP15.82■□□□□ 0.12
NUP88-210ENST00000574867 YARS2Q9Y2Z4 477 aaKnown RBP15.82■□□□□ 0.12
NUP88-210ENST00000574867 PCDHGB7Q9Y5F8 929 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 FBP2O00757 339 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 ACOX3O15254 700 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 SOX30O94993 753 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 HOXB9P17482 250 aaPredicted RBP15.82■□□□□ 0.12
NUP88-210ENST00000574867 DRD5P21918 477 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 TXNL4AP83876 142 aaKnown RBP15.82■□□□□ 0.12
NUP88-210ENST00000574867 MFAP5Q13361 173 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 LASP1Q14847 261 aaKnown RBP15.82■□□□□ 0.12
NUP88-210ENST00000574867 B3GNTL1Q67FW5 361 aaPredicted RBP15.82■□□□□ 0.12
NUP88-210ENST00000574867 C6orf120Q7Z4R8 191 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 DHDDSQ86SQ9 333 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 TAGAPQ8N103 731 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 SLC15A4Q8N697 577 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 FITM2Q8N6M3 262 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 PCYOX1LQ8NBM8 494 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms