RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SYNPOQ8N3V7 929 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 MDGA1Q8NFP4 955 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 WFDC5Q8TCV5 224 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 GPR137Q96N19 417 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 TEFMQ96QE5 360 aaKnown RBP9.08□□□□□ -0.96
CCDC40-212ENST00000574799 DDOQ99489 341 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 SEPT5Q99719 369 aaPredicted RBP9.08□□□□□ -0.96
CCDC40-212ENST00000574799 BOCQ9BWV1 1114 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 ARL6Q9H0F7 186 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 CDH10Q9Y6N8 788 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 TRBV5-3A0A0A0MS03 114 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 OSMP13725 252 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 RAB3BP20337 219 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 EVX1P49640 407 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 STARP49675 285 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 B2MP61769 119 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 FGL2Q14314 439 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 SHEQ5VZ18 495 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 RAET1GQ6H3X3 334 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 CDC73Q6P1J9 531 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 LINGO4Q6UY18 593 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 C1orf52Q8N6N3 182 aaKnown RBP9.08□□□□□ -0.96
CCDC40-212ENST00000574799 NANOGP1Q8N7R0 232 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 OR8D4Q8NGM9 314 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 TMEM163Q8TC26 289 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 GIMAP1Q8WWP7 306 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 MRPS31Q92665 395 aaKnown RBP9.08□□□□□ -0.96
CCDC40-212ENST00000574799 OR2M2Q96R28 347 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 P2RY13Q9BPV8 354 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 GINS4Q9BRT9 223 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 MIEF1Q9NQG6 463 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 GKN1Q9NS71 199 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 ACTR10Q9NZ32 417 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 MGAT4CQ9UBM8 478 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 VPS29Q9UBQ0 182 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 ZNF282Q9UDV7 671 aaPredicted RBP9.08□□□□□ -0.96
CCDC40-212ENST00000574799 PADI2Q9Y2J8 665 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 NEUROG3Q9Y4Z2 214 aa9.08□□□□□ -0.96
CCDC40-212ENST00000574799 PRSS44E7EML9 344 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 SLC19A2O60779 497 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ATG13O75143 517 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 LALBAP00709 142 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 TFP02787 698 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 RHOCP08134 193 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ZP3P21754 424 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 PAICSP22234 425 aaKnown RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 CCR6P51684 374 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 BTG1P62324 171 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 DEFB103AP81534 67 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ZNF169Q14929 603 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ZNF791Q3KP31 576 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 PLK5Q496M5 336 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 SLC25A25Q6KCM7 469 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 TNFAIP8L2Q6P589 184 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 TRIM46Q7Z4K8 759 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 OR11H4Q8NGC9 324 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 TEX47Q8TBZ9 253 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 IGSF21Q96ID5 467 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 RADILQ96JH8 1075 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 TM6SF2Q9BZW4 377 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 SLC6A17Q9H1V8 727 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ZNF334Q9HCZ1 680 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 PTTG3PQ9NZH4 202 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ZNF69Q9UC07 566 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 SCP2D1Q9UJQ7 156 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 RUVBL1Q9Y265 456 aaKnown RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 OARD1Q9Y530 152 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 OR51B4Q9Y5P0 310 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ENPP4Q9Y6X5 453 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 MUC22E2RYF6 1773 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ARPC5O15511 151 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 TAPBPO15533 448 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 RP2O75695 350 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 STC2O76061 302 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 SIX6O95475 246 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 TCRBP04435 133 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 TACR2P21452 398 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 BDKRB1P46663 353 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ZNF140P52738 457 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 RPS24P62847 133 aaKnown RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ARF5P84085 180 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 SEMG2Q02383 582 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 SNTB2Q13425 540 aaKnown RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ZNF273Q14593 569 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 LGALSLQ3ZCW2 172 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 CCNJQ5T5M9 372 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 LYPD4Q6UWN0 246 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 OR11H7Q8NGC8 314 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ALG14Q96F25 216 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 MSLNLQ96KJ4 702 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 DEFB118Q96PH6 123 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 FCRL4Q96PJ5 515 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 SLC38A2Q96QD8 506 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 TBX5Q99593 518 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 MGME1Q9BQP7 344 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 FNDC11Q9BVV2 318 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 IMP3Q9NV31 184 aaKnown RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 FBXL2Q9UKC9 423 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 PRELID3BQ9Y3B1 194 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ZFP37Q9Y6Q3 630 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms