RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PRRC1Q96M27 445 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 YIPF4Q9BSR8 244 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 SPATA5L1Q9BVQ7 753 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 GLIPR2Q9H4G4 154 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 ISYNA1Q9NPH2 558 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 RPRD1BQ9NQG5 326 aaKnown RBP14.74□□□□□ -0.05
NUP88-207ENST00000573584 MALT1Q9UDY8 824 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 OR6C70A6NIJ9 312 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 FGF18O76093 207 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 PSKH1P11801 424 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 CPN2P22792 545 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 HLA-DMAP28067 261 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 FGF9P31371 208 aaPredicted RBP14.74□□□□□ -0.05
NUP88-207ENST00000573584 PPP3R1P63098 170 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 UBE3AQ05086 875 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 DUSP6Q16828 381 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 CNIH2Q6PI25 160 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 VWCEQ96DN2 955 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 ARHGAP9Q9BRR9 750 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 PELI2Q9HAT8 420 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 EXOSC1Q9Y3B2 195 aaKnown RBP14.74□□□□□ -0.05
NUP88-207ENST00000573584 NDUFS4O43181 175 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 LIMS3P0CW19 117 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 LIMS4P0CW20 117 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 CD79BP40259 229 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 MAP2K3P46734 347 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 ST8SIA6P61647 398 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 GPR19Q15760 415 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 TATDN3Q17R31 274 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 RIPOR3Q96MK2 946 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 AMDHD1Q96NU7 426 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 PRR14Q9BWN1 585 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 HCFC2Q9Y5Z7 792 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 OR1F1O43749 312 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 HPGDSO60760 199 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 ALX3O95076 343 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 FGBP02675 491 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 SERPIND1P05546 499 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 ADH1AP07327 375 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 CHRM4P08173 479 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 PRKCAP17252 672 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 PTGER1P34995 402 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 SLC6A11P48066 632 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 MAP4K2Q12851 820 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 MINDY4Q4G0A6 757 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 CLEC12AQ5QGZ9 265 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 UBE3DQ7Z6J8 389 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 GLCCI1Q86VQ1 547 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 SLAIN1Q8ND83 568 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 GRPEL2Q8TAA5 225 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 BBS10Q8TAM1 723 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 SLC38A2Q96QD8 506 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 PRRG3Q9BZD7 231 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 PPP1R3EQ9H7J1 279 aa14.73□□□□□ -0.05
NUP88-207ENST00000573584 MTCL1Q9Y4B5 1905 aaKnown RBP14.73□□□□□ -0.05
NUP88-207ENST00000573584 A0A087WUU8 490 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 HCN1O60741 890 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 MOSPD3O75425 235 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 PRNPP04156 253 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 PPM1AP35813 382 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 NCBP2P52298 156 aaKnown RBP eCLIP14.72□□□□□ -0.05
NUP88-207ENST00000573584 MLC1Q15049 377 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 P2RY14Q15391 338 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 CLPPQ16740 277 aaPredicted RBP14.72□□□□□ -0.05
NUP88-207ENST00000573584 NDUFAF5Q5TEU4 345 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 AMZ2Q86W34 360 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 DPH7Q9BTV6 452 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 WASH6PQ9NQA3 447 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 RBFOX1Q9NWB1 397 aaKnown RBP14.72□□□□□ -0.05
NUP88-207ENST00000573584 CLCA2Q9UQC9 943 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 CKAP5Q14008 2032 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 TRDV1A0A1B0GX56 115 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 GLOD5A6NK44 160 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 PPM1DO15297 605 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 ALAS2P22557 587 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 SOX18P35713 384 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 MLLT1Q03111 559 aaPredicted RBP14.72□□□□□ -0.05
NUP88-207ENST00000573584 ZNF77Q15935 545 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 MZT2BQ6NZ67 158 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 CD200R1LQ6Q8B3 271 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 ZNF765Q7L2R6 523 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 YIPF7Q8N8F6 280 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 NLGN4YQ8NFZ3 816 aaPredicted RBP14.72□□□□□ -0.05
NUP88-207ENST00000573584 OR8D4Q8NGM9 314 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 ARRDC3Q96B67 414 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 HDHD5Q9BXW7 423 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 QRSL1Q9H0R6 528 aaKnown RBP14.72□□□□□ -0.05
NUP88-207ENST00000573584 TBC1D17Q9HA65 648 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 BCL2L10Q9HD36 194 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 GIMAP4Q9NUV9 329 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 TAS2R7Q9NYW3 318 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 SLC23A2Q9UGH3 650 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 VEGFDO43915 354 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 CCNYL3P0C7X3 344 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 KHKP50053 298 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 TAS2R41P59536 307 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 GALK2Q01415 458 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 DPTQ07507 201 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 IL18Q14116 193 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 ARHGAP15Q53QZ3 475 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms