RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 C20orf204Q6ZNR8 217 aa18■□□□□ 0.47
CCDC40-206ENST00000572083 CNEP1R1Q8N9A8 125 aa18■□□□□ 0.47
CCDC40-206ENST00000572083 C17orf47Q8NEP4 570 aa18■□□□□ 0.47
CCDC40-206ENST00000572083 UBXN10Q96LJ8 280 aa18■□□□□ 0.47
CCDC40-206ENST00000572083 DDX31Q9H8H2 851 aaKnown RBP18■□□□□ 0.47
CCDC40-206ENST00000572083 CXorf49A8MYA2 514 aaPredicted RBP17.99■□□□□ 0.47
CCDC40-206ENST00000572083 RHOXF2BP0C7M4 288 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 NT5EP21589 574 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 TCEA1P23193 301 aaKnown RBP17.99■□□□□ 0.47
CCDC40-206ENST00000572083 CHMP24386 653 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 CD79BP40259 229 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 PLCXD2Q0VAA5 305 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 TMEM81Q6P7N7 255 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 SCIMPQ6UWF3 145 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 ZNF550Q7Z398 422 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 NUDT13Q86X67 352 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 TEX9Q8N6V9 391 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 WDSUB1Q8N9V3 476 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 UBTD2Q8WUN7 234 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 STARD4Q96DR4 205 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 OMA1Q96E52 524 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 ZC3HAV1LQ96H79 300 aaKnown RBP17.99■□□□□ 0.47
CCDC40-206ENST00000572083 GPR22Q99680 433 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 ITPAQ9BY32 194 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 GSX2Q9BZM3 304 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 TAS2R10Q9NYW0 307 aa17.99■□□□□ 0.47
CCDC40-206ENST00000572083 EXO1Q9UQ84 846 aaKnown RBP17.99■□□□□ 0.47
CCDC40-206ENST00000572083 PRAMEF25A6NGN4 478 aa17.98■□□□□ 0.47
CCDC40-206ENST00000572083 CRLF1O75462 422 aa17.98■□□□□ 0.47
CCDC40-206ENST00000572083 CBR3O75828 277 aa17.98■□□□□ 0.47
CCDC40-206ENST00000572083 PTX3P26022 381 aaPredicted RBP17.98■□□□□ 0.47
CCDC40-206ENST00000572083 ARFIP1P53367 373 aa17.98■□□□□ 0.47
CCDC40-206ENST00000572083 CLDN18P56856 261 aa17.98■□□□□ 0.47
CCDC40-206ENST00000572083 PHEXP78562 749 aa17.98■□□□□ 0.47
CCDC40-206ENST00000572083 ZKSCAN8Q15776 578 aaPredicted RBP17.98■□□□□ 0.47
CCDC40-206ENST00000572083 P4HA3Q7Z4N8 544 aa17.98■□□□□ 0.47
CCDC40-206ENST00000572083 ZBED8Q8IZ13 594 aa17.98■□□□□ 0.47
CCDC40-206ENST00000572083 OR7G1Q8NGA0 311 aa17.98■□□□□ 0.47
CCDC40-206ENST00000572083 MARK4Q96L34 752 aa17.98■□□□□ 0.47
CCDC40-206ENST00000572083 RBBP8Q99708 897 aa17.98■□□□□ 0.47
CCDC40-206ENST00000572083 OPN3Q9H1Y3 402 aaPredicted RBP17.98■□□□□ 0.47
CCDC40-206ENST00000572083 TXNDC16Q9P2K2 825 aa17.98■□□□□ 0.47
CCDC40-206ENST00000572083 PCDHGA11Q9Y5H2 935 aa17.98■□□□□ 0.47
CCDC40-206ENST00000572083 SONP18583 2426 aaKnown RBP17.98■□□□□ 0.47
CCDC40-206ENST00000572083 TP73O15350 636 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 UGT2B11O75310 529 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 SEC31AO94979 1220 aaKnown RBP17.97■□□□□ 0.47
CCDC40-206ENST00000572083 S1PR1P21453 382 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 LOXP28300 417 aaPredicted RBP17.97■□□□□ 0.47
CCDC40-206ENST00000572083 UGT2B10P36537 528 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 XKP51811 444 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 RAB10P61026 200 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 EEF1A1P68104 462 aaKnown RBP17.97■□□□□ 0.47
CCDC40-206ENST00000572083 DLG1Q12959 904 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 EXOSC7Q15024 291 aaKnown RBP17.97■□□□□ 0.47
CCDC40-206ENST00000572083 EEF1A1P5Q5VTE0 462 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 ZNF474Q6S9Z5 364 aaPredicted RBP17.97■□□□□ 0.47
CCDC40-206ENST00000572083 NUP54Q7Z3B4 507 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 LRRC8AQ8IWT6 810 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 SLC35F6Q8N357 371 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 OR4K14Q8NGD5 310 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 STAG3L4Q8TBR4 150 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 PGM2Q96G03 612 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 SFXN2Q96NB2 322 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 ATOH8Q96SQ7 321 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 TRIM31Q9BZY9 425 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 BRINP2Q9C0B6 783 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 FBXL2Q9UKC9 423 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 DLGAP4Q9Y2H0 992 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 TSC22D4Q9Y3Q8 395 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 ANGPTL3Q9Y5C1 460 aa17.97■□□□□ 0.47
CCDC40-206ENST00000572083 CHD3Q12873 2000 aaKnown RBP17.97■□□□□ 0.47
CCDC40-206ENST00000572083 E7ESA3 106 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 HCRTR2O43614 444 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 CPMP14384 443 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 POU2F1P14859 743 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 ZNF708P17019 499 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 NAGAP17050 411 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 NEK2P51955 445 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 SIRPAP78324 504 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 KRTAP1-1Q07627 177 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 SNTA1Q13424 505 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 CUL3Q13618 768 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 CPSF6Q16630 551 aaKnown RBP eCLIP17.96■□□□□ 0.47
CCDC40-206ENST00000572083 LIPJQ5W064 366 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 AAGABQ6PD74 315 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 BTLAQ7Z6A9 289 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 CMC1Q7Z7K0 106 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 ISCA2Q86U28 154 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 KLHL7Q8IXQ5 586 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 HEY2Q9UBP5 337 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 BCAP29Q9UHQ4 241 aa17.96■□□□□ 0.47
CCDC40-206ENST00000572083 HEATR5AQ86XA9 2040 aa17.95■□□□□ 0.46
CCDC40-206ENST00000572083 LRRC14BA6NHZ5 514 aa17.95■□□□□ 0.46
CCDC40-206ENST00000572083 H0YIV9 168 aa17.95■□□□□ 0.46
CCDC40-206ENST00000572083 KERAO60938 352 aa17.95■□□□□ 0.46
CCDC40-206ENST00000572083 SSTR1P30872 391 aa17.95■□□□□ 0.46
CCDC40-206ENST00000572083 SRD5A2P31213 254 aa17.95■□□□□ 0.46
CCDC40-206ENST00000572083 KCNJ5P48544 419 aa17.95■□□□□ 0.46
CCDC40-206ENST00000572083 PIK3CGP48736 1102 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms