RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 HNRNPCL1O60812 293 aaKnown RBP21.78■■□□□ 1.08
RAB40C-212ENST00000569575 CLPSP04118 112 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 ESRRAP11474 423 aaPredicted RBP21.78■■□□□ 1.08
RAB40C-212ENST00000569575 EFNA1P20827 205 aaPredicted RBP21.78■■□□□ 1.08
RAB40C-212ENST00000569575 SOAT1P35610 550 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 CHI3L1P36222 383 aaPredicted RBP21.78■■□□□ 1.08
RAB40C-212ENST00000569575 ART3Q13508 389 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 REP15Q6BDI9 236 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 C6orf120Q7Z4R8 191 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 DHDDSQ86SQ9 333 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 RETREG3Q86VR2 466 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 GALNT16Q8N428 558 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 ZFP90Q8TF47 636 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 HSPBAP1Q96EW2 488 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 ZNF354BQ96LW1 612 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 STACQ99469 402 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 MESP1Q9BRJ9 268 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 LMF2Q9BU23 707 aaKnown RBP21.78■■□□□ 1.08
RAB40C-212ENST00000569575 ACTRT3Q9BYD9 372 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 TPT1P8Q9HAU6 139 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 KCNMB2Q9Y691 235 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 TRBV5-3A0A0A0MS03 114 aa21.77■■□□□ 1.08
RAB40C-212ENST00000569575 ARGFXA6NJG6 315 aa21.77■■□□□ 1.08
RAB40C-212ENST00000569575 ASNA1O43681 348 aa21.77■■□□□ 1.08
RAB40C-212ENST00000569575 HOXB9P17482 250 aaPredicted RBP21.77■■□□□ 1.08
RAB40C-212ENST00000569575 FADDQ13158 208 aa21.77■■□□□ 1.08
RAB40C-212ENST00000569575 EBPQ15125 230 aaKnown RBP21.77■■□□□ 1.08
RAB40C-212ENST00000569575 CRB2Q5IJ48 1285 aa21.77■■□□□ 1.08
RAB40C-212ENST00000569575 DND1Q8IYX4 353 aaKnown RBP21.77■■□□□ 1.08
RAB40C-212ENST00000569575 OR8J3Q8NGG0 315 aa21.77■■□□□ 1.08
RAB40C-212ENST00000569575 LRRC58Q96CX6 371 aa21.77■■□□□ 1.08
RAB40C-212ENST00000569575 VSTM2LQ96N03 204 aa21.77■■□□□ 1.08
RAB40C-212ENST00000569575 BTBD9Q96Q07 612 aa21.77■■□□□ 1.08
RAB40C-212ENST00000569575 CGREF1Q99674 301 aa21.77■■□□□ 1.08
RAB40C-212ENST00000569575 EPS8L2Q9H6S3 715 aa21.77■■□□□ 1.08
RAB40C-212ENST00000569575 DUSP22Q9NRW4 184 aa21.77■■□□□ 1.08
RAB40C-212ENST00000569575 GPR55Q9Y2T6 319 aaPredicted RBP21.77■■□□□ 1.08
RAB40C-212ENST00000569575 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 HRKO00198 91 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 CLIC1O00299 241 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 CEACAM4O75871 244 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 ATP5HO75947 161 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 HMGN2P05204 90 aaKnown RBP21.76■■□□□ 1.07
RAB40C-212ENST00000569575 NAGAP17050 411 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 ITGA3P26006 1051 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 MAP3K8P41279 467 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 CDKN2CP42773 168 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 EXOSC7Q15024 291 aaKnown RBP21.76■■□□□ 1.07
RAB40C-212ENST00000569575 DEFB109BQ30KR1 87 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 EXOSC6Q5RKV6 272 aaKnown RBP21.76■■□□□ 1.07
RAB40C-212ENST00000569575 MFSD12Q6NUT3 480 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 CDC73Q6P1J9 531 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 RPS19BP1Q86WX3 136 aaKnown RBP21.76■■□□□ 1.07
RAB40C-212ENST00000569575 TAGAPQ8N103 731 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 ADIPOR1Q96A54 375 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 GIMAP5Q96F15 307 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 THOC3Q96J01 351 aaKnown RBP21.76■■□□□ 1.07
RAB40C-212ENST00000569575 LCORQ96JN0 433 aaPredicted RBP21.76■■□□□ 1.07
RAB40C-212ENST00000569575 ANKRD27Q96NW4 1050 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 WWTR1Q9GZV5 400 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 FOLH1BQ9HBA9 442 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 GPATCH2Q9NW75 528 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 MYOTQ9UBF9 498 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 ZNF223Q9UK11 482 aaPredicted RBP21.76■■□□□ 1.07
RAB40C-212ENST00000569575 MRTO4Q9UKD2 239 aaKnown RBP21.76■■□□□ 1.07
RAB40C-212ENST00000569575 PCDHGB7Q9Y5F8 929 aa21.76■■□□□ 1.07
RAB40C-212ENST00000569575 FRG2CA6NGY1 282 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 TO15178 435 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 AK1P00568 194 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 ITPKBP27987 946 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 PRKAG1P54619 331 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 NRG3P56975 720 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 Q0VFX4 171 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 MEP1AQ16819 746 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 CYP27C1Q4G0S4 372 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 RUNDC3AQ59EK9 446 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 ATP1A1-AS1Q5TC04 95 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 BORAQ6PGQ7 559 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 C6orf89Q6UWU4 347 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 SZRD1Q7Z422 152 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 C9orf40Q8IXQ3 194 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 POU5F2Q8N7G0 328 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 OR52N2Q8NGI0 321 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 RCN3Q96D15 328 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 MAGED4Q96JG8 741 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 LMF1Q96S06 567 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 PIGUQ9H490 435 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 Q9N2J8 555 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 ARL8BQ9NVJ2 186 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 ABI3Q9P2A4 366 aa21.75■■□□□ 1.07
RAB40C-212ENST00000569575 YARS2Q9Y2Z4 477 aaKnown RBP21.75■■□□□ 1.07
RAB40C-212ENST00000569575 IGF2RP11717 2491 aa21.74■■□□□ 1.07
RAB40C-212ENST00000569575 EBAG9O00559 213 aa21.74■■□□□ 1.07
RAB40C-212ENST00000569575 AIM2O14862 343 aa21.74■■□□□ 1.07
RAB40C-212ENST00000569575 NKX2-2O95096 273 aa21.74■■□□□ 1.07
RAB40C-212ENST00000569575 ALPPP05187 535 aa21.74■■□□□ 1.07
RAB40C-212ENST00000569575 GSNP06396 782 aa21.74■■□□□ 1.07
RAB40C-212ENST00000569575 ALOX5P09917 674 aa21.74■■□□□ 1.07
RAB40C-212ENST00000569575 ITGAMP11215 1152 aa21.74■■□□□ 1.07
RAB40C-212ENST00000569575 CD1EP15812 388 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms