RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 RNF14Q9UBS8 474 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 BCAP29Q9UHQ4 241 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 FN1P02751 2386 aaKnown RBP14.14□□□□□ -0.15
NME3-211ENST00000568561 JMJD1CQ15652 2540 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 A0A1B0GTL3 188 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 ESYT3A0FGR9 886 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 H0Y3Z8 333 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 SNPHO15079 494 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 ERAL1O75616 437 aaKnown RBP14.13□□□□□ -0.15
NME3-211ENST00000568561 ALDOAP04075 364 aaKnown RBP14.13□□□□□ -0.15
NME3-211ENST00000568561 CYP4B1P13584 511 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 PORP16435 677 aaPredicted RBP14.13□□□□□ -0.15
NME3-211ENST00000568561 TCEA1P23193 301 aaKnown RBP14.13□□□□□ -0.15
NME3-211ENST00000568561 OPRM1P35372 400 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 PTGDSP41222 190 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 CCNG1P51959 295 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 DCAF7P61962 342 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 SORDQ00796 357 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 PLCXD2Q0VAA5 305 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 MGAT2Q10469 447 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 TRAF3Q13114 568 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 SF3B4Q15427 424 aaKnown RBP eCLIP14.13□□□□□ -0.152e-10■■■■■ 29.7
NME3-211ENST00000568561 LTB4RQ15722 352 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 CCNYL2Q5T2Q4 361 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 FRG2Q64ET8 278 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 TTC19Q6DKK2 380 aaPredicted RBP14.13□□□□□ -0.15
NME3-211ENST00000568561 KLC3Q6P597 504 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 OR7G1Q8NGA0 311 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 OR14L1PQ8NHC6 308 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 FRG2BQ96QU4 278 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 RBM24Q9BX46 236 aaKnown RBP14.13□□□□□ -0.15
NME3-211ENST00000568561 CALHM2Q9HA72 323 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 FARSBQ9NSD9 589 aaKnown RBP14.13□□□□□ -0.15
NME3-211ENST00000568561 MAT2BQ9NZL9 334 aa14.13□□□□□ -0.15
NME3-211ENST00000568561 TNPO3Q9Y5L0 923 aaKnown RBP14.13□□□□□ -0.15
NME3-211ENST00000568561 ARID1AO14497 2285 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 ICOSLGO75144 302 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 UGT2B11O75310 529 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 NME6O75414 186 aaPredicted RBP14.12□□□□□ -0.15
NME3-211ENST00000568561 ERN1O75460 977 aaKnown RBP14.12□□□□□ -0.15
NME3-211ENST00000568561 CBX7O95931 251 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 HRGP04196 525 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 FOSL1P15407 271 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 TYK2P29597 1187 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 CPA2P48052 419 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 STARP49675 285 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 SERPINB8P50452 374 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 MAPK12P53778 367 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 MRPS35P82673 323 aaKnown RBP14.12□□□□□ -0.15
NME3-211ENST00000568561 GUCY2DQ02846 1103 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 PRICKLE4Q2TBC4 344 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 SLC48A1Q6P1K1 146 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 COMMD6Q7Z4G1 85 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 KRTAP1-3Q8IUG1 177 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 C17orf47Q8NEP4 570 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 INTS12Q96CB8 462 aaKnown RBP14.12□□□□□ -0.15
NME3-211ENST00000568561 KLHL29Q96CT2 875 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 G6PC3Q9BUM1 346 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 ZBTB26Q9HCK0 441 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 RYDENQ9NUL5 291 aaKnown RBP14.12□□□□□ -0.15
NME3-211ENST00000568561 PSD3Q9NYI0 1048 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 PCTPQ9UKL6 214 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 CES1P1Q9UKY3 287 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 PLLPQ9Y342 182 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 UTP11Q9Y3A2 253 aaKnown RBP14.12□□□□□ -0.15
NME3-211ENST00000568561 PCDHA9Q9Y5H5 950 aa14.12□□□□□ -0.15
NME3-211ENST00000568561 PRAMEF25A6NGN4 478 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 IL18BPO95998 194 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 ACTL6AO96019 429 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 TSPAN8P19075 237 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 DEKP35659 375 aaKnown RBP14.11□□□□□ -0.15
NME3-211ENST00000568561 CAV1Q03135 178 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 LTBQ06643 244 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 TRMT12Q53H54 448 aaKnown RBP14.11□□□□□ -0.15
NME3-211ENST00000568561 NUP54Q7Z3B4 507 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 CCDC91Q7Z6B0 441 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 METTL4Q8N3J2 472 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 WDSUB1Q8N9V3 476 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 OR4F6Q8NGB9 312 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 OR52R1Q8NGF1 315 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 ZPLD1Q8TCW7 415 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 ANP32BQ92688 251 aaKnown RBP14.11□□□□□ -0.15
NME3-211ENST00000568561 LCORQ96JN0 433 aaPredicted RBP14.11□□□□□ -0.15
NME3-211ENST00000568561 HBEGFQ99075 208 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 OR2B2Q9GZK3 357 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 ANKRA2Q9H9E1 313 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 XPR1Q9UBH6 696 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 ADAM29Q9UKF5 820 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 SLC12A4Q9UP95 1085 aa14.11□□□□□ -0.15
NME3-211ENST00000568561 SH3D21A4FU49 640 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 GOLGA6L10A6NI86 522 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 C17orf51A8MQB3 221 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 PPP6CO00743 305 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 PCSK2P16519 638 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 CD53P19397 219 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 HOXC12P31275 282 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 GCKP35557 465 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 CPOXP36551 454 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 ALDH9A1P49189 494 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 GALNT1Q10472 559 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms