RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 EPPINO95925 133 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 ATP5F1P24539 256 aaPredicted RBP13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 PTPN6P29350 595 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 PLCXD2Q0VAA5 305 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 LTB4RQ15722 352 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 TRMT12Q53H54 448 aaKnown RBP13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 NHSL2Q5HYW2 709 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 TIGD3Q6B0B8 471 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 VASNQ6EMK4 673 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 FAM180BQ6P0A1 224 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 GPRIN3Q6ZVF9 776 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 TRMT10CQ7L0Y3 403 aaKnown RBP13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 NUP54Q7Z3B4 507 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 LACC1Q8IV20 430 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 PM20D2Q8IYS1 436 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 RELL2Q8NC24 303 aaPredicted RBP13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 NAXEQ8NCW5 288 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 OR52R1Q8NGF1 315 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 HGDQ93099 445 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 ZNF681Q96N22 645 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 HEY2Q9UBP5 337 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 UTS2RQ9UKP6 389 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 STK38LQ9Y2H1 464 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 SLC6A5Q9Y345 797 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 MED12Q93074 2177 aa13.76□□□□□ -0.21
SCAMP2-209ENST00000567638 KDM4EB2RXH2 506 aaPredicted RBP13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 DVL2O14641 736 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 RIPK2O43353 540 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 PCDH7O60245 1069 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 ZWINTO95229 277 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 ESRRBO95718 433 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 CHN1P15882 459 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 PCSK2P16519 638 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 IMPDH1P20839 514 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 HMOX2P30519 316 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 CEACAM8P31997 349 aaPredicted RBP13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 TIMP3P35625 211 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 EMDP50402 254 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 HTR6P50406 440 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 WNT3P56703 355 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 DCAF7P61962 342 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 MRPS35P82673 323 aaKnown RBP13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 TOMM20Q15388 145 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 EIPR1Q53HC9 387 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 WIPI1Q5MNZ9 446 aaPredicted RBP13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 DESI1Q6ICB0 168 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 SLC30A6Q6NXT4 461 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 ARSKQ6UWY0 536 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 ANGPTL8Q6UXH0 198 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 SPNS3Q6ZMD2 512 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 SLC22A9Q8IVM8 553 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 GBP7Q8N8V2 638 aaPredicted RBP13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 TNIP2Q8NFZ5 429 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 OR1J4Q8NGS1 313 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 METTL6Q8TCB7 284 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 ZNF675Q8TD23 568 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 NODALQ96S42 347 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 OSBPL11Q9BXB4 747 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 UGT2B28Q9BY64 529 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 ACPTQ9BZG2 426 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 PRODH2Q9UF12 536 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 DLGAP4Q9Y2H0 992 aa13.75□□□□□ -0.21
SCAMP2-209ENST00000567638 FRG2CA6NGY1 282 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 SNPHO15079 494 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 TO15178 435 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 UGT2B11O75310 529 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 ULK1O75385 1050 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 IL3P08700 152 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 RHOXF2BP0C7M4 288 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 DRD2P14416 443 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 BMP7P18075 431 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 DRD5P21918 477 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 BMP5P22003 454 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 PTGDSP41222 190 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 PPICP45877 212 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 ASCL1P50553 236 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 PRKAA2P54646 552 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 PKNOX1P55347 436 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 RAE1P78406 368 aaKnown RBP13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 ACSM2AQ08AH3 577 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 LCP2Q13094 533 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 SNTA1Q13424 505 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 SF3B4Q15427 424 aaKnown RBP eCLIP13.74□□□□□ -0.219e-7■□□□□ 10.7
SCAMP2-209ENST00000567638 SPIN4Q56A73 249 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 ZNF628Q5EBL2 1059 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 DCST1Q5T197 706 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 NSUN5P2Q63ZY6 315 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 ACSM2BQ68CK6 577 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 IFT20Q8IY31 132 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 FAM83FQ8NEG4 500 aaPredicted RBP13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 ACMSDQ8TDX5 336 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 L3HYPDHQ96EM0 354 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 SH3GL2Q99962 352 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 GALNT9Q9HCQ5 603 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 PFDN4Q9NQP4 134 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 EHD3Q9NZN3 535 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 KLRF1Q9NZS2 232 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 FETUBQ9UGM5 382 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 CAMK2AQ9UQM7 478 aa13.74□□□□□ -0.21
SCAMP2-209ENST00000567638 MED12LQ86YW9 2145 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms