RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TMEM110Q86TL2 294 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 DEFB107AQ8IZN7 70 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 PQLC3Q8N755 202 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TFB1MQ8WVM0 346 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 RXFP2Q8WXD0 754 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 RADILQ96JH8 1075 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 CNDP2Q96KP4 475 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 SORT1Q99523 831 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 VAT1Q99536 393 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TCHPQ9BT92 498 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 YTHDF1Q9BYJ9 559 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 SLC2A11Q9BYW1 496 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 EFCAB1Q9HAE3 211 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 PALMDQ9NP74 551 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TCF7L2Q9NQB0 619 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 GTSE1Q9NYZ3 720 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 MRPL15Q9P015 296 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 EML5Q05BV3 1969 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 PCDH15Q96QU1 1955 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 SMIM28A0A1B0GU29 152 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 PRSS51A0A1B0GVH4 220 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 A0A1B0GVM2 712 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 MITFO75030 526 aaPredicted RBP3.92□□□□□ -1.78
LINC00561-201ENST00000565815 BMP10O95393 424 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 CLDN14O95500 239 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 HSPA4LO95757 839 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 CALCAP01258 141 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 FAM200BP0CF97 657 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 IDO1P14902 403 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 IL11P20809 199 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 BCKDHBP21953 392 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 NNMTP40261 264 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 NPY2RP49146 381 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 CDK9P50750 372 aaKnown RBP3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ATP4BP51164 291 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ARPP19P56211 112 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 NAA20P61599 178 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 TFAMQ00059 246 aaKnown RBP3.92□□□□□ -1.78
LINC00561-201ENST00000565815 STX5Q13190 355 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 NFATC4Q14934 902 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 CTF1Q16619 201 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 KCTD21Q4G0X4 260 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 PIGGQ5H8A4 983 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ATF7IP2Q5U623 682 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 GGNBP1Q5YKI7 109 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 SLC30A6Q6NXT4 461 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 PRMT9Q6P2P2 845 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF534Q76KX8 674 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 SLC26A9Q7LBE3 791 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 TSPAN33Q86UF1 283 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 CCDC190Q86UF4 302 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF248Q8NDW4 579 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 HTR3CQ8WXA8 447 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 CCDC126Q96EE4 140 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 SGF29Q96ES7 293 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 RBBP8Q99708 897 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 TRIM15Q9C019 465 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 SNX25Q9H3E2 840 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF385DQ9H6B1 395 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 SLC35C2Q9NQQ7 365 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 PNPLA3Q9NST1 481 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 MALT1Q9UDY8 824 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 IL17BQ9UHF5 180 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 PCSK1NQ9UHG2 260 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 RIMS3Q9UJD0 308 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 EMCNQ9ULC0 261 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 UBQLN1Q9UMX0 589 aaKnown RBP3.92□□□□□ -1.78
LINC00561-201ENST00000565815 HES2Q9Y543 173 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF292O60281 2723 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 THADAQ6YHU6 1953 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 GAGE12JA6NER3 117 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 CD8B2A6NJW9 211 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 TRIM64CA6NLI5 447 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 TMEM178BH3BS89 294 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 TFAP2AP05549 437 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 HAPLN1P10915 354 aaPredicted RBP3.92□□□□□ -1.78
LINC00561-201ENST00000565815 IL4RP24394 825 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 CYP2F1P24903 491 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 HRH2P25021 359 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 AZGP1P25311 298 aaKnown RBP3.92□□□□□ -1.78
LINC00561-201ENST00000565815 PIK3R1P27986 724 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 CCR10P46092 362 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ALDH3B2P48448 385 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 RPL14P50914 215 aaKnown RBP3.92□□□□□ -1.78
LINC00561-201ENST00000565815 CDH13P55290 713 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ESRRGP62508 458 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 DLG1Q12959 904 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 FLOT2Q14254 428 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF77Q15935 545 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 PLEKHS1Q5SXH7 462 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 SEL1L3Q68CR1 1132 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 SIGIRRQ6IA17 410 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 TMEM211Q6ICI0 200 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 OR6B2Q6IFH4 312 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ZYG11AQ6WRX3 759 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 PIM3Q86V86 326 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF420Q8TAQ5 688 aaPredicted RBP3.92□□□□□ -1.78
LINC00561-201ENST00000565815 TMEM163Q8TC26 289 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 PNPT1Q8TCS8 783 aaKnown RBP3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ADAMTS16Q8TE57 1224 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms